Gene detail

Detailed information of Aala_g969.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_047123283.1, cellular tumor antigen p53 isoform X2 [Hydra vulgaris]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
Q29537	Cellular tumor antigen p53 OS=Canis lupus familiaris OX=9615 GN=TP53 PE=2 SV=2
Q9JLB4	Cubilin OS=Mus musculus OX=10090 GN=Cubn PE=1 SV=3
O70244	Cubilin OS=Rattus norvegicus OX=10116 GN=Cubn PE=1 SV=2

Gene family	Subfamily
Transcription Factors Family	P53

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13820	NCOA6_TRADD-N	Nuclear receptor coactivator 6, TRADD-N domain	Domain	Interproscan
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF10266	Strumpellin	Hereditary spastic paraplegia protein strumpellin	Family	Interproscan
PF00870	P53	P53 DNA-binding domain	Domain	Interproscan
PF16746	BAR_3	BAR domain of APPL family	Domain	Interproscan
PF00431	CUB	CUB domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR032715	Domain	Nuclear receptor coactivator 6, TRADD-N domain	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR036691	Homologous_superfamily	Endonuclease/exonuclease/phosphatase superfamily	Interproscan
IPR000477	Domain	Reverse transcriptase domain	Interproscan
IPR019393	Family	WASH complex, subunit strumpellin	Interproscan
IPR012346	Homologous_superfamily	p53/RUNT-type transcription factor, DNA-binding domain superfamily	Interproscan
IPR011615	Domain	p53, DNA-binding domain	Interproscan
IPR008967	Homologous_superfamily	p53-like transcription factor, DNA-binding domain superfamily	Interproscan
IPR002117	Family	p53 tumour suppressor family	Interproscan
IPR027267	Homologous_superfamily	AH/BAR domain superfamily	Interproscan
IPR047234	Family	GRAF family	Interproscan
IPR004148	Domain	BAR domain	Interproscan
IPR016024	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR000859	Domain	CUB domain	Interproscan
IPR035914	Homologous_superfamily	Spermadhesin, CUB domain superfamily	Interproscan
IPR050841	Family	Developmental metalloproteases and endocytic receptors	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47027	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR11447	CELLULAR TUMOR ANTIGEN P53	Interproscan
PTHR21301	REVERSE TRANSCRIPTASE	Interproscan
PTHR12552	OLIGOPHRENIN 1	Interproscan
PTHR24251	OVOCHYMASE-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0071203	Cellular Component	WASH complex	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0003700	Molecular Function	DNA-binding transcription factor activity	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0000976	Molecular Function	transcription cis-regulatory region binding	Interproscan
GO:0006915	Biological Process	apoptotic process	Interproscan
GO:0000978	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0005096	Molecular Function	GTPase activator activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K26675	FSIP2; fibrous sheath-interacting protein 2	-	Secretion system	ko02044	deepkoala
K26675	FSIP2; fibrous sheath-interacting protein 2	-	Cilium and associated proteins	ko03037	deepkoala