Detailed information of Aala_g983.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_035659306.1, uncharacterized protein LOC118404344 [Branchiostoma floridae]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A5PK71Parkin coregulated gene protein OS=Bos taurus OX=9913 GN=PACRG PE=1 SV=1
Q9DAK2Parkin coregulated gene protein homolog OS=Mus musculus OX=10090 GN=Pacrg PE=1 SV=1
Q96M98Parkin coregulated gene protein OS=Homo sapiens OX=9606 GN=PACRG PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12640UPF0489UPF0489 domainDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF14529Exo_endo_phos_2Endonuclease-reverse transcriptase DomainInterproscan
PF21788TNP-like_GBDTNP-like, GTP-binding insertion domainDomainInterproscan
PF21787TNP-like_RNaseH_NTNP-like, RNase H N-terminal domainDomainInterproscan
PF10274ParcGParkin co-regulated proteinRepeatInterproscan
PF07727RVT_2Reverse transcriptase (RNA-dependent DNA polymerase)FamilyInterproscan
PF01562Pep_M12B_propepReprolysin family propeptideFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR024131FamilyUncharacterised protein family UPF0489Interproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR048366DomainTransposable element P transposase-like, GTP-binding insertion domainInterproscan
IPR048365DomainTransposable element P transposase-like, RNase H domain, N-terminalInterproscan
IPR019399FamilyParkin co-regulated proteinInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR013103DomainReverse transcriptase, RNA-dependent DNA polymeraseInterproscan
IPR002870DomainPeptidase M12B, propeptideInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23274DNA HELICASE-RELATEDInterproscan
PTHR13225MISEXPRESSION SUPPRESSOR OF RAS 6Interproscan
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR47577THAP DOMAIN-CONTAINING PROTEIN 6Interproscan
PTHR21207PARKIN COREGULATED GENE PROTEIN PARK2 COREGULATEDInterproscan
PTHR42648TRANSPOSASE, PUTATIVE-RELATEDInterproscan
PTHR33198ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005657Cellular Componentreplication forkInterproscan
GO:0006260Biological ProcessDNA replicationInterproscan
GO:0032508Biological ProcessDNA duplex unwindingInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0030544Molecular FunctionHsp70 protein bindingInterproscan
GO:0051879Molecular FunctionHsp90 protein bindingInterproscan
GO:0060548Biological Processobsolete negative regulation of cell deathInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K26163PACRG; parkin coregulated gene protein-Ubiquitin systemko04121deepkoala

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