Detailed information of Aala_g984.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_020903013.1, RNA-binding protein 5-B [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A4IGK4RNA-binding protein 5 OS=Xenopus tropicalis OX=8364 GN=rbm5 PE=2 SV=1
P70501RNA-binding protein 10 OS=Rattus norvegicus OX=10116 GN=Rbm10 PE=1 SV=1
P98175RNA-binding protein 10 OS=Homo sapiens OX=9606 GN=RBM10 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17780OCREOCRE domainDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000504DomainRNA recognition motif domainInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR041591DomainOCRE domainInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13948RNA-BINDING PROTEINInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR14885UNCHARACTERIZEDInterproscan
PTHR21301REVERSE TRANSCRIPTASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0000398Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0005634Cellular ComponentnucleusInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K12831SF3B4, SAP49; splicing factor 3B subunit 4-Spliceosomeko03041deepkoala

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