Gene detail

Detailed information of Aala_g986.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_037797211.1, uncharacterized protein LOC119592460 [Penaeus monodon]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
Q6R2W3	SCAN domain-containing protein 3 OS=Homo sapiens OX=9606 GN=SCAND3 PE=1 SV=1
O95789	Zinc finger MYM-type protein 6 OS=Homo sapiens OX=9606 GN=ZMYM6 PE=1 SV=2
Q80SY5	Pre-mRNA-splicing factor 38B OS=Mus musculus OX=10090 GN=Prpf38b PE=1 SV=1

Gene family	Subfamily
Transcription Factors Family	zf-C2H2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00098	zf-CCHC	Zinc knuckle	Domain	Interproscan
PF00096	zf-C2H2	Zinc finger, C2H2 type	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR021109	Homologous_superfamily	Aspartic peptidase domain superfamily	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR001878	Domain	Zinc finger, CCHC-type	Interproscan
IPR050951	Family	Retrovirus-related Pol polyprotein	Interproscan
IPR043128	Homologous_superfamily	Reverse transcriptase/Diguanylate cyclase domain	Interproscan
IPR005037	Family	Pre-mRNA-splicing factor 38	Interproscan
IPR026630	Family	EPM2A-interacting protein 1/ZBED8-like	Interproscan
IPR013087	Domain	Zinc finger C2H2-type	Interproscan
IPR036236	Homologous_superfamily	Zinc finger C2H2 superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR35450	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR37984	PROTEIN CBG26694	Interproscan
PTHR23142	UNCHARACTERIZED	Interproscan
PTHR34213	NUCLEAR TRANSPORT FACTOR 2 (NTF2) FAMILY PROTEIN	Interproscan
PTHR47027	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR45913	EPM2A-INTERACTING PROTEIN 1	Interproscan
PTHR24376	ZINC FINGER PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0071011	Cellular Component	precatalytic spliceosome	Interproscan
GO:0000978	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0001228	Molecular Function	DNA-binding transcription activator activity, RNA polymerase II-specific	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan