Detailed information of Aala_g993.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_020916271.1, uncharacterized protein LOC110253659 isoform X3 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
D2CLZ9Transcription factor atoh8 OS=Danio rerio OX=7955 GN=atoh8 PE=2 SV=1
Q96SQ7Transcription factor ATOH8 OS=Homo sapiens OX=9606 GN=ATOH8 PE=1 SV=2
Q99NA2Transcription factor Atoh8 OS=Mus musculus OX=10090 GN=Atoh8 PE=1 SV=1
Gene familySubfamily
Transcription Factors FamilybHLH

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00010HLHHelix-loop-helix DNA-binding domainDomainInterproscan
PF01351RNase_HIIRibonuclease HIIFamilyInterproscan
PF01344Kelch_1Kelch motifRepeatInterproscan
PF01094ANF_receptorReceptor family ligand binding regionFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011598DomainMyc-type, basic helix-loop-helix (bHLH) domainInterproscan
IPR036638Homologous_superfamilyHelix-loop-helix DNA-binding domain superfamilyInterproscan
IPR050359FamilyBasic helix-loop-helix transcription factorsInterproscan
IPR004649FamilyRibonuclease H2, subunit AInterproscan
IPR024567DomainRibonuclease HII/HIII domainInterproscan
IPR001352FamilyRibonuclease HII/HIIIInterproscan
IPR023160Homologous_superfamilyRibonuclease HII, helix-loop-helix cap domain superfamilyInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR006652RepeatKelch repeat type 1Interproscan
IPR015915Homologous_superfamilyKelch-type beta propellerInterproscan
IPR001828DomainReceptor, ligand binding regionInterproscan
IPR028082Homologous_superfamilyPeriplasmic binding protein-like IInterproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR022894FamilyOligoribonucleaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19290BASIC HELIX-LOOP-HELIX PROTEIN NEUROGENIN-RELATEDInterproscan
PTHR10954RIBONUCLEASE H2 SUBUNIT AInterproscan
PTHR45632LD33804PInterproscan
PTHR47481-Interproscan
PTHR11697GENERAL TRANSCRIPTION FACTOR 2-RELATED ZINC FINGER PROTEINInterproscan
PTHR11046OLIGORIBONUCLEASE, MITOCHONDRIALInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0046983Molecular Functionprotein dimerization activityInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0007423Biological Processsensory organ developmentInterproscan
GO:0045944Biological Processpositive regulation of transcription by RNA polymerase IIInterproscan
GO:0061564Biological Processaxon developmentInterproscan
GO:0070888Molecular FunctionE-box bindingInterproscan
GO:0004523Molecular FunctionRNA-DNA hybrid ribonuclease activityInterproscan
GO:0016070Biological ProcessRNA metabolic processInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0006298Biological Processmismatch repairInterproscan
GO:0032299Cellular Componentribonuclease H2 complexInterproscan
GO:0043137Biological ProcessDNA replication, removal of RNA primerInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0000175Molecular Function3'-5'-RNA exonuclease activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10743RNASEH2A; ribonuclease H2 subunit AEC:3.1.26.4
DNA replication proteinsko03032deepkoala

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