Detailed information of Aala_g997.t1 in Alatina alata

Genomic Location: :...
NR annotation: CAH3196211.1, unnamed protein product, partial [Porites evermanni]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q3UI43BRISC and BRCA1-A complex member 1 OS=Mus musculus OX=10090 GN=Babam1 PE=1 SV=1
Q5R7L2BRISC and BRCA1-A complex member 1 OS=Pongo abelii OX=9601 GN=BABAM1 PE=2 SV=1
Q9NWV8BRISC and BRCA1-A complex member 1 OS=Homo sapiens OX=9606 GN=BABAM1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF14893PNMAPNMAFamilyInterproscan
PF17917RT_RNaseHRNase H-like domain found in reverse transcriptaseDomainInterproscan
PF00665rveIntegrase core domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR040427FamilyFl(2)d-associated complex componentInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR048270DomainParaneoplastic antigen Ma-like, C-terminal domainInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR041373DomainReverse transcriptase, RNase H-like domainInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR026126FamilyBRISC and BRCA1-A complex member 1Interproscan
IPR005819FamilyLinker histone H1/H5Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR38563FL(2)D-ASSOCIATED COMPLEX COMPONENTInterproscan
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR15660UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0036396Cellular ComponentRNA N6-methyladenosine methyltransferase complexInterproscan
GO:0080009Biological Processobsolete mRNA methylationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0006302Biological Processdouble-strand break repairInterproscan
GO:0007095Biological Processmitotic G2 DNA damage checkpoint signalingInterproscan
GO:0016604Cellular Componentnuclear bodyInterproscan
GO:0045739Biological Processpositive regulation of DNA repairInterproscan
GO:0070531Cellular ComponentBRCA1-A complexInterproscan
GO:0070552Cellular ComponentBRISC complexInterproscan
GO:0000786Cellular ComponentnucleosomeInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006334Biological Processnucleosome assemblyInterproscan
GO:0030527Molecular Functionstructural constituent of chromatinInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K20776BABAM, NBA1, MERIT40; BRISC and BRCA1-A complex member 1-DNA repair and recombination proteinsko03400deepkoala

TOP