Detailed information of Acti_005159-T1 in Actinernus sp. WN-2022

Genomic Location: ScLC4GM_64:28371739...28390758
NR annotation: no NCBI-NR hit recorded
Species abbreviation ASP1 · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Gene family
Family typeMembership / link
Ubiquitin familyE3|E3 activity RING|RING · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02262
all species →
Cbl_NCBL proto-oncogene N-terminal domain 1DomainInterproscan
PF02762
all species →
Cbl_N3CBL proto-oncogene N-terminus, SH2-like domainDomainInterproscan
PF02761
all species →
Cbl_N2CBL proto-oncogene N-terminus, EF hand-like domainDomainInterproscan
PF13920
all species →
zf-C3HC4_3Zinc finger, C3HC4 type (RING finger)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036860
all species →
Homologous_superfamilySH2 domain superfamilyInterproscan
IPR003153
all species →
DomainAdaptor protein Cbl, N-terminal helicalInterproscan
IPR014742
all species →
DomainAdaptor protein Cbl, SH2-like domainInterproscan
IPR014741
all species →
DomainAdaptor protein Cbl, EF hand-likeInterproscan
IPR001841
all species →
DomainZinc finger, RING-typeInterproscan
IPR013083
all species →
Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR015940
all species →
DomainUbiquitin-associated domainInterproscan
IPR024162
all species →
FamilyAdaptor protein CblInterproscan
IPR009060
all species →
Homologous_superfamilyUBA-like superfamilyInterproscan
IPR036537
all species →
Homologous_superfamilyAdaptor protein Cbl, N-terminal domain superfamilyInterproscan
IPR011992
all species →
Homologous_superfamilyEF-hand domain pairInterproscan
IPR017907
all species →
Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR024159
all species →
DomainAdaptor protein Cbl, PTB domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23007
all species →
CBLInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0007166
all species →
Biological Processcell surface receptor signaling pathwayInterproscan
GO:0005509
all species →
Molecular Functioncalcium ion bindingInterproscan
GO:0004842
all species →
Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0005886
all species →
Cellular Componentplasma membraneInterproscan
GO:0007165
all species →
Biological Processsignal transductionInterproscan
GO:0007175
all species →
Biological Processnegative regulation of epidermal growth factor-activated receptor activityInterproscan
GO:0017124
all species →
Molecular FunctionSH3 domain bindingInterproscan
GO:0023051
all species →
Biological Processregulation of signalingInterproscan
GO:0030971
all species →
Molecular Functionreceptor tyrosine kinase bindingInterproscan
GO:0045121
all species →
Cellular Componentmembrane raftInterproscan
GO:0061630
all species →
Molecular Functionubiquitin protein ligase activityInterproscan
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan
GO:0001784
all species →
Molecular Functionphosphotyrosine residue bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for Acti_005159-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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