Gene detail

Detailed information of Acti_005299-T1 in Actinernus sp. WN-2022

Genomic Location: ScLC4GM_64:31933492...31934553
NR annotation: no NCBI-NR hit recorded
Species Actinernus sp. WN-2022 · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF16685 all species →	zf-RING_10	zinc RING finger of MSL2	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013083 all species →	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR017907 all species →	Conserved_site	Zinc finger, RING-type, conserved site	Interproscan
IPR037922 all species →	Family	E3 ubiquitin-protein ligase MSL2	Interproscan
IPR032043 all species →	Domain	E3 ubiquitin-protein ligase Msl2, zinc RING finger	Interproscan
IPR033467 all species →	Domain	Tesmin/TSO1-like CXC domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR16048 all species →	MSL2-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016567 all species →	Biological Process	protein ubiquitination	Interproscan
GO:0043984 all species →	Biological Process	obsolete histone H4-K16 acetylation	Interproscan
GO:0061630 all species →	Molecular Function	ubiquitin protein ligase activity	Interproscan
GO:0072487 all species →	Cellular Component	MSL complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K13164	MSL2; male-specific lethal 2	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.