Detailed information of Acti_014159-T1 in Actinernus sp. WN-2022

Genomic Location: ScLC4GM_578:154622770...154649259
NR annotation: no NCBI-NR hit recorded
Species Actinernus sp. WN-2022 · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00147
all species →
Fibrinogen_CFibrinogen beta and gamma chains, C-terminal globular domainDomainInterproscan
PF13385
all species →
Laminin_G_3Concanavalin A-like lectin/glucanases superfamilyDomainInterproscan
PF07534
all species →
TLDTLDDomainInterproscan
PF00354
all species →
PentaxinPentaxin familyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002181
all species →
DomainFibrinogen, alpha/beta/gamma chain, C-terminal globular domainInterproscan
IPR006571
all species →
DomainTLDc domainInterproscan
IPR050373
all species →
FamilyFibrinogen C-terminal domain-containing proteinInterproscan
IPR013320
all species →
Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR036056
all species →
Homologous_superfamilyFibrinogen-like, C-terminalInterproscan
IPR001759
all species →
FamilyPentraxin-relatedInterproscan
IPR014716
all species →
Homologous_superfamilyFibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1Interproscan
IPR030476
all species →
Conserved_sitePentaxin, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19143
all species →
FIBRINOGEN/TENASCIN/ANGIOPOEITINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005615
all species →
Cellular Componentextracellular spaceInterproscan
GO:0062023
all species →
Cellular Componentcollagen-containing extracellular matrixInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for Acti_014159-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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