Gene detail

Detailed information of Acti_040263-T1 in Actinernus sp. WN-2022

Genomic Location: ScLC4GM_1636:143443977...143470744
NR annotation: no NCBI-NR hit recorded
Species Actinernus sp. WN-2022 · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Acti_040263-T1

ATGGAAGGAACATTTAAAAGTCCTCGACCGCTTCCCCATATTCTAAACGAGGTGACATTCAGCCACAAAAAGGCAAAGCGAGCGGTTAGTGAGAGTGACTGTTTACCCCCAAGACCTCCAGTCAAATCTGCACCGCCGGTTAGTCGACTTTTCAAACACTCTAGAAAGCACCATGTAGGACCTCATGAAGTCAGTTTTCATGGCAGTGGAAAAAAGCTGAAAAGTCCTCACTACAATGAGAAATCAAATGAGCTGTACTTTGAACAGTGCTTTGAGGTTGTCAGTAAACTTGGTGCAGGTTCCTTTGGTGAGGTATTCAAGGTCCAAAGTAAAGAAGATGGAAATTATTATGCAATTAAGAAGTCTCGTGAAAGGTTTCGTGGTGATGCAGACAGGAAATATAAGTTAGAGGAAGTGAACAAGCACGAGCAGTTGAGGATGCACCCAAATTGTGTCCATTTTATAAAGGCATGGGAAGAAAGCTTGAAGGATTACCTTGAAAGAAGTGATTCTGTACCAGAGAAGGAAGTGTGGGACTTCCTAATGGATTTGACATTGGGTCTAAAGCATCTACATGACAATGGAATGGTGCACATGGACATCAAGCCAGCCAATGTGTTCATTGGTAGAGACAGACTCTGTAAAATTGGGGACTTTGGTCTGGTCTTAGAGTTATCTAAGTGTGACATGTCTGATGCCTTAGAAGGAGACCCAATGTACCTTGCTCCTGAGTTGATGCAGGGCAGTTTTACTAAAGCTGCAGATATCTTCAGTTTAGGGATCACATTGCTAGAAGCTGCTTGTGACTTGGAACTGCCGAGAGGTGGAGACACCTGGCATCAACTGAGGAATGGACAGCTGCCAGACGTTTTCACCCAAGGATTGTCACCAGAACTTGGTAGATTAATTTCTTCAATGATGGATCCTGTTCCACACAGACGACCCATAGTGGATGACATTCTTGCACTACCTGCAGTGACAAAGAATTCCTCTATTTCCGAGGTTTATGTTAGCATATTGTCCTTCATTGTGTGGATGTTTATGGTCATATGCTGGCCTTTTCAACCGATTAAAAGTATATGGTTCCCCAAAACAGACGACCCTAAACAAGACACTTCTTACAATTCAGATTCCAGTTTTTCATTGGAAGATTCCCACAATATTTCCCAAGAAAGTATGAGCACGCCAGATCGAAGTTCCTCATTTGAGAACTTGTTGACACAGCCAGTGGCCAAACCCCCATGGCATCGGGAGGGATACTGCAGCTCTCCAGCTCACCTACAGACTCCGTGTTCACGTGTAACAATGTCAAGACTTTCTCCTTCACCACATGTCCAACCTGTTAATGAACGGCTCACCCCACCGTTGAACACAAGCAGTCCTAGTCGAGGCCAGTACACACCTACCTCAGAGGGCAGGAGAGGACGACTGTTTGAAGATGATGGTGTTACGGCAAAGATCGGAGTTGGTCCAAAAAACCTACTAGATGTATTCGAGGGTGCAGCGATATAATTTGTTCCATGGCTCTGTTGTATCCAGTGTATGGGAATAGAATTGAATCGAAGGACACTAATTGCACTTCCTCAATCATACCAGAGGTTGCACAGAACCAGTACAGGACCTACGCCAGGAGGAAGCGGGTAAAAACACGTTGACGGAACCATGTGGGACTCTGGAAGACCGTCATTGCTGTTTTAAAGAATAGAAACTTTTTATTACCAATAACAGTTGGGACGCATTTTGGGAGACATACTCCGAGTATTCCGAAAAAGGAATACACCGAAAAACCAATGTTGTTTACATCATTTATCAAACACACAAAATAATTACCAAGGCACGTACTAGAAGTAGCTACTACTTTCACATTTCAGAAGAGGGATATGTGCAGGATTTCGAGGCATTCTAATTTAGAAATAACTGGAATAAAGTCCCCGAAAAACCGCGCCCTTTTTACCGTGTTCATTGAAGTGCGAGCTTGGAAGTTTCAAGTTGCGATCCGTCCAAAAACATTGCATTTAACCACTAGACCGTCAATCAAACGCGGATTCTAGTCCCCAAACAAAGCTTTCAAAGGCCGAGACTTGTTTGATTTCGACGGTCCGCTAAATGCAATACTTGACACTTTCACAGTCGCACTTAAATGGAGACGGTAATAATAACTATGCCACCATTCTACAGTGTTCTGTTCTACAGACATTGTTCAGTCGATGATGAACTAGCACAAGTAGCCGGTATCAACACACTGAAGGCTGGGGATTGAAAAGTTAAACTACATTTTTGTCAATTTAAGTAGCGGCGCTTCGGAATTGAGTAGTCGGCGAAAATGCCGACCGCTGGTTCTTCTGGAGAGTACTGATTCAAAACTTTGCTTTCCCGAGTTAAGTAAGGGTTGTTGGCCTGGAGTGAGGTGTATATGTGATATATTCACCTAGGCGACACACGACGTAAATATATCATATACGCCCGAGCGATTAGGTTTTTCTCATTGTAAACAATAACATAAATCATGAGAAAGCATTGTTTTCCTGGTATATTGTTGCTAAGAACCCATCAAATATTTTCTCTTGCGCGTGATTGGTTGCATGAATGCGTCACGTGACCCGATATTTTCTCCGCGAACGGGAAACATCGGCGAATACACCCCCTGTGAGCGTATAAGCGCGCGTCAAAGAAAATATTTCAAGGATGAGTAAGAAAAATAACCTACATTTTGGCGTCGAAATATGCCCTGATATTTGTCCTTGGACATTATCTGATCCTCGAAGCTCACAGTTTCCCTCGAGCTTCGTTTTCGGGAACTGTTCTCTTCTCGGATTAAATAATGTCCGCGGACGAAATATCAGGGCATATTTCGATGCCACAAATAGGTTTGTGTATTTATTACATTACCGTTCACAAGGCTTGTCATTGTTTATCTTTTTCGGTCGGACAGAGGACTAGAAAACCAAGAAAATTAATCTGTAAACAATTCCTTAACAAACCGGTAAAGGTAACCATACCACTATATCGTTTTTAAGGTCAAGCCAATTTTGGGCTGGTATCACGTTAGCCTGCTTATGCAGACTTATTTTTTCACTCTCATAAATTCGAAGAAAAAAGTAACGTCTGCTTACCCGAGCGCTTAATTAGTTTCCAATATGCAAACATGAAGTCGCACGTTTGTTTTATTTTTCTGCCCAATCAAAGCCGTTGTTAGAATTTTAGTGAATTGGCGCGCCAGTGAACACTCTCCTATGATTGATCAATGTCAAATGTATTGTCTGAACTTCTTTTAAATGTAACATACGTCACTTTCCAGGATATGAAAGGTAAAATCTGATTGGTCCATAACACAATGAGGTGTGAATATAGGAAACTAATTAAGCGCTCGGGTAAGCAGACGTTACTTTTTTCTTCGAATTCATGAGAGTGAAAAAAATACGTCTGCATAGCAGGCTAGTATCACGTTTGCAATAAGTATTTCTTAAAGCTTGAAAAGTAAGTGTAAATATTTAAAATCGTTAAAGGCTGATAATTTCCCTGCTAAAAGATCTCCGTGTAAAAGGCCTTACATTTTACTAGCTTGGAAAGAGAGGGAGACCTGCTAGCAGGGAAACTGAGAATCTGTGCGCTTTTTTAAGTGCGTTATGTCAGTGCAAATAAATTGTAAAGTTAATTAGATTCTAGATTAAAACAGAAATAAATAAGATTTTGAACGACA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00069 all species →	Pkinase	Protein kinase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050339 all species →	Family	Cell Cycle and Stress Response Kinase	Interproscan
IPR008271 all species →	Active_site	Serine/threonine-protein kinase, active site	Interproscan
IPR000719 all species →	Domain	Protein kinase domain	Interproscan
IPR017441 all species →	Binding_site	Protein kinase, ATP binding site	Interproscan
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11042 all species →	EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004672 all species →	Molecular Function	protein kinase activity	Interproscan
GO:0004713 all species →	Molecular Function	protein tyrosine kinase activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan
GO:0051321 all species →	Biological Process	meiotic cell cycle	Interproscan
GO:0110031 all species →	Biological Process	negative regulation of G2/MI transition of meiotic cell cycle	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K06633	PKMYT; membrane-associated tyrosine- and threonine-specific cdc2-inhibitory kinase	EC:2.7.11.1	Protein phosphatases and associated proteins	ko01009	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.