Gene detail

Detailed information of Acti_044246-T1 in Actinernus sp. WN-2022

Genomic Location: ScLC4GM_1753:25694517...25712916
NR annotation: no NCBI-NR hit recorded
Species Actinernus sp. WN-2022 · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Acti_044246-T1

TGAAAGAGTAACAAATTGAAAACAAAATGGTTAGTGGGCGATTACAATAGCTTGGCATTAATTCTCATCATGTGAGCCACGTGTGATCATCCTTGCTTTGGTCACGAGAAATACGACACATGACTGAATCATAAGTACAGGAAATGCAATCTCCAGTTTTTACCACTTGGAAGAGGTATAACTGAAGGCCCGGGCTGGTTTCTTCCGGTTTCTCGACTCAAAATGGCGTCCTTGGGATTATGGGGAGCGTTATTGGTTCTGTTCTCGCTTTATTTCGTGGGAGAATCGTTTCGGTTGAAAGCTCGTTTTCCTATTCCTCACCGGGTCGAGTTTCAAAGATTAACCAAGAAGTCACTGTGCTCATACTGTGTTTATGAGACGAGGTACTACAGTCAAAAGTTGGACCATTTTAACTTCATCACGAACAAAACGTTCATGCAGCGCTACCTGGTCAGCAGCAGACAGTGGAAAGCAGGCGGACCAATCCTCTTCTACACTGGAAACGAGGGAGACATCACGTGGTTTGCTAACAACACGGGCTTTATGTGGGATAATGCCCAGGAGTTTGGTGCTATGCTGGTGTTCGCTGAACACAGATACTACGGAGAGACCCTGCCTTTCGGGAAGAAATCCTACGATGGTCCGAAGTACCTCGGGTACTTAACGTCAGAACAAGCATTGGCTGACTTTGCAAGACTTATCCGTCATATTAAGGTGACAATTCCAGGAGCCAAGGAGAGCCCTGTCGTGTCTATTGGCGGCTCGTATGGCGGGATGTTAGCAGCCTGGTTAAGGATGAAATATCCGAACATTGTCATTGGTGCCTTGGCTGCGTCGGCTCCTATTCTTCAGTTCCAGGGTCTAACACCTTGCGGGAAATTCTACGAGATCGTAACACAAGACTTTCGACATGATGGAAATGATAGCTGTGTCAATTGCATCAAGAGATCGTGGGATACTATAGACAAATTAGGAAAAACCGAGGACGGGCGTCAAACTCTTTCTAAAGTCTTCAAGATGTGTTCACCAATCAAGACTAAGAACAACGTAACCCAGCTGCAGTACTGGCTGAGCGAGACCTGGGTCAACTTAGCAATGGTTGACTATCCATACCCAGCTAATTTCCTTGAACCTCTACCTGCCTGGCCTATAAAGAAATCGTGTTCTCACCTTCAAAATGACAAATTGCCTGACGTTGGGTTATTGGGTGCTATTGCTGAGGCGGTTGGAGTTTACTACAACAGTTCAGGGAAAGCAAAGTGCTTCAATATATCACAACAAGCAGTGTCGTTCCTCGGGGACGAGGGTTGGTATTTTCAGGCCTGTACAGAAATGGCAATGCCTCTTTGCACAGACGGGATACATGATATGTTCACACCTTCAAAGTGGAACTTTAAGGAATACGCAGAAGCATGTCAAAAGAATCAAGGAGTCACACCGCTCGAGTACTGGATCGAGACACAGTATGGTGGACGAAACATCGAGGCTCACAGTAACATTATATTTAGTAACGGCCTTCTGGACCCGTGGTCGGCAGGCGGGGTTACCAAGACTCTCTCTCCCAGCTTGGTAGCCGTGCTGATCGAAGATGGCGCTCATCACCTCGACCTGAGGCATAAGAACATTCACGACCCGCCATCACTAAAACATGCTAGAGAAGTAGAAAAATATTACCTTCACAGCTGGATTGCTAAGTACAAGAATTGTAAGAAGAGAAAGATCCACAAGTTGAACAAGACAGAGACTCACATGAAGCAGGAATATTAGTTTGACAATTTGTTTATACAGTAATTACATTTGGCATTTAGCTCTTTATAATATTTTCTCCTGCGTATAATTGGTGGAATCGCGTCAGGTGACCTGATAACTGCTCACTGCCTGATTGGCTCTTCTCACTTGGCGGCCATGTTGAGTCCCAGGAGGACAAAAGCCTTTGTTTTTGCTACTCTAAACTGGCTCGTTCTGAACCTTCTAAAACCTAACCCCCAAATTTG

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05577 all species →	Peptidase_S28	Serine carboxypeptidase S28	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029058 all species →	Homologous_superfamily	Alpha/Beta hydrolase fold	Interproscan
IPR008758 all species →	Family	Peptidase S28	Interproscan
IPR042269 all species →	Homologous_superfamily	Serine carboxypeptidase S28, SKS domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11010 all species →	PROTEASE S28 PRO-X CARBOXYPEPTIDASE-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006508 all species →	Biological Process	proteolysis	Interproscan
GO:0070008 all species →	Molecular Function	serine-type exopeptidase activity	Interproscan
GO:0008239 all species →	Molecular Function	dipeptidyl-peptidase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K01285	PRCP; lysosomal Pro-X carboxypeptidase	EC:3.4.16.2	Peptidases and inhibitors	ko01002	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.