Gene detail

Detailed information of Acti_044993-T1 in Actinernus sp. WN-2022

Genomic Location: ScLC4GM_1753:36365799...36383888
NR annotation: no NCBI-NR hit recorded
Species Actinernus sp. WN-2022 · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Acti_044993-T1

ATGGGTGATTGTACGGATGCTGGACTTCCAGAAAGCAAGACAATAGAAGATGAGCTTTATATTCAGCAAGTTGAATCAAAATCATACGATCCCTGGCCCTGGGACTCTGATCTAGCCAGGGCAATTGCAAATGAAAGCCAAGGCGACTTGTACAGTAACACAGTGTCCTCGTATCTAAGAGAATTCTTTATCTTGCTAGCCATATGCAACACTGTGGTAGTAAACAGTCACATTCAAAGAACTCAATCATCCTCTACTCCACCTCACGAAAATGTTTACGGAAAACACGTGCACTCTAACGACGAAAGTAGCGAATATAAAGATTTGCTAAGCAGTCCAGATATGAACCATGTGATGGCTGGTGATGAGGCATCAGTTCTGAAGTCACTCGACCTCGGCGATCCTTCTGGTCTTACGGTAAATGTTGATGGTGGTTGGGTGAACGAGGGGCTGGTTCCCTCTCCAGCTAAAAACCAACAGCAACAGCCGGCAAATTGTTCCACGTTTTCCAATCCAGAGCCATCTACATCAAGACACAATTTGCCTTCATCTTTACTTGATACGTACGATAGAACAAATTACGATGATGTAGCTTACGAAGCTGAATCTCCAGACGAGGCTGCATTAGTGAAGATTGCCAGTTCTTACGGTTTCAAACTTCTATCTCGAAGCCCCGACAGTGTAACTGTATTAATTCCTGGAGAAGGACCAGTGACTTTTGAGGTCCTACATGTGTTGTCGTTTGACTCAACAAGGAAGCGGATGTCCATAGTAGTTCGCCGCCCGAGTGATGGGACGATCCTCGTGTACTGTAAAGGTGCTGACTCGGCCTTGATGTCACAGCTGTCTCCTAGTAATTATCCTAGTTCTGATAATACAGACAGTGGAGCCCCAGGGGGTGCTGGTGCGCAGGGTAGTAGAGAATGTTCAATTGCAGAGGATACGGAGAATCACTTGAATGAGTACGCCAGGGATGGGCTGAGAACGTTATGCATGGCAAGAAAGGAACTTTCAGACGAAGAATACAAGGAATGGTTAGTGGAGCACAGGAAAGCGGAAACAGCTCTACATCATCGAGAGAGTAAACTACAAGAGTCGGCAATTAGACTGGAGTGGAACATGGAGCTCCTGGGAGCCACTGGTATTGAGGACCGCTTACAAGATGGTGTCCCTGAGGCCATCGCAAAGCTGAGGGAAGGGGGACTAAAATTGTGGGTGCTGACAGGGGATAAACAGGAGACTGCAGTCAACGTTGGCTATGCCTGTAAACTCCTTGACAATAGCATGCACAAGATCGTCCTGAATGCCAAGACCAAGGACGAGTGTAGCAGTCAGATATATTCCTGGTTGTCCCATCTGAAACTTGACAACACTTCCAGTAGTGTTAGTGGTTCAACAACATTTGCTACGGTTTCTGGTGAAACAGAGAGTCTGCCAGACCAACCGATGGGTTTGATCATCGATGGACGAACCTTGCTCTACGCTCTGGAGAAGCCACTCAATGCCAAGTTCTTACGACTAGCGGCACAGTGTCAGGTCGTGTTGTGTTGTAGAGCTACTCCTATACAGAAGGCTGGAGTGGTGCAGCTGGTCCGTTACGGTCTGAAGGTGATGACCCTTGCCATAGGAGATGGTGCTAACGATGTCAGTATGATACAGATGGCTGATGTGGGTATTGGCATCACGGGTCAGGAAGGCATGCAGGCCGTCATGGCTAGCGACTTCGCTATTGGTAGATTCAAGTTCCTTACTCAACTCCTATTGGTCCATGGACACTGGTGTTACGACAGGATCACCAAAATGTTCCTGTACTTCTTCTACAAGAACGCGATGTTTGTTCTAGTGCTATTCTGGTTCCAGCTCTACAATGGCTTTTCAGGTTCCAATGCCATTGATGACTTATCCTTAATCTTTTTCAACCTTCTCTTCACCGCTGCTCCGCCCATCATCTGTGGCATCCTTGATAAAGACCTGCCTGCCTCTGTTCTTAAGGACAAACCCTACTTATACAAGTCGGGCCAGGAAAGCGAGTTGTATACGCGGAAGTTATTCTGGGTCACCATCCTAGATGCTTTGTATCAGAGTATAGTTCTATTTTTCTCCTGTTTGTTGGTGTTTGAAGGCACTTCTGCTGACGATAGAATGGTTGGTATCACGATGCAGCAGGCAGCTGTCATCCTGGTCAGTCTACACATGGGCCTGGTCACTGCACAATGGACGTGGATTCATCACCTCATACTCTGGGGGAGCGTACTCATCTCGTTCTTGTGGACTCTCTTTTTTGGCATCTTTCAGCCCTCTCACAAGATCTATTTTGTATCGTTTGTCACCATGGCGACCAAGGAGTTCTGGTGTCTGTGTGTACTGATTGCTGCGACGGCTCTCTTGCCGAGGTATTCTCTGACGGCAATAAGGAGAACGCTAAAACCTTCGGAAATAGACAAGGCTCAGATTGAGATGAAGAGCCCACAATACAGCAGTAGAACAGTAAGCGTGGACGCTACAGAGGCCATCAGCGTCACGCCCAAAACACAAACATCCTGCACCTGA

Transcript

Acti_044993-T1

AGAAAATTTGCAGTCTATCGTCCAGTAAGTTACGTTGTTTCGTGAAAAATCTTCCCGTAAATTTGTTTTTATAGGATAATATGGTTATTTCATGGTTTTCTATGGAATACCGGCGAAAATTTCACTCGAAATTCATATTATTTTGGTATACAACTCTTCTAAAGGCTCGTTGTATACCAAGTAATACTAATTTCTCCTGAAATATTCGCCTGTTTTCCATAGAAAACTATGAAATAACCAGTAAGTATATACTATCCACTGAGGGTGGCCACTGCCACAGATTTGTTTGCGTCCTCAGTAGGGGCTTACTATTTAACGTCCTGATCGAAGAAGACGTGAAGGTCTAACCATTTGCAGACGACAGAGCAAAGGCAGCACCTTCTCCCAGTTATTTTAAGACCCTGAAGGGTGATCCGGCCTGGGAATCAAACCCACAACCTGCTACACAACAGACCAGCACTTTAACCAGAGAGCTTAAACTGGGAGGCGGTACTTGCCAAGAATAGGGACTTCAAGGTACGACGACCACGGTCTACGACTACGGACGCGCACCAGTGAAGGACTGGAACGAGACACTCGTGTTGGTTTCATTGCACCGTACGTAGCGAGTCGACCGGCATGGGTGATTGTACGGATGCTGGACTTCCAGAAAGCAAGACAATAGAAGATGAGCTTTATATTCAGCAAGTTGAATCAAAATCATACGATCCCTGGCCCTGGGACTCTGATCTAGCCAGGGCAATTGCAAATGAAAGCCAAGGCGACTTGTACAGTAACACAGTGTCCTCGTATCTAAGAGAATTCTTTATCTTGCTAGCCATATGCAACACTGTGGTAGTAAACAGTCACATTCAAAGAACTCAATCATCCTCTACTCCACCTCACGAAAATGTTTACGGAAAACACGTGCACTCTAACGACGAAAGTAGCGAATATAAAGATTTGCTAAGCAGTCCAGATATGAACCATGTGATGGCTGGTGATGAGGCATCAGTTCTGAAGTCACTCGACCTCGGCGATCCTTCTGGTCTTACGGTAAATGTTGATGGTGGTTGGGTGAACGAGGGGCTGGTTCCCTCTCCAGCTAAAAACCAACAGCAACAGCCGGCAAATTGTTCCACGTTTTCCAATCCAGAGCCATCTACATCAAGACACAATTTGCCTTCATCTTTACTTGATACGTACGATAGAACAAATTACGATGATGTAGCTTACGAAGCTGAATCTCCAGACGAGGCTGCATTAGTGAAGATTGCCAGTTCTTACGGTTTCAAACTTCTATCTCGAAGCCCCGACAGTGTAACTGTATTAATTCCTGGAGAAGGACCAGTGACTTTTGAGGTCCTACATGTGTTGTCGTTTGACTCAACAAGGAAGCGGATGTCCATAGTAGTTCGCCGCCCGAGTGATGGGACGATCCTCGTGTACTGTAAAGGTGCTGACTCGGCCTTGATGTCACAGCTGTCTCCTAGTAATTATCCTAGTTCTGATAATACAGACAGTGGAGCCCCAGGGGGTGCTGGTGCGCAGGGTAGTAGAGAATGTTCAATTGCAGAGGATACGGAGAATCACTTGAATGAGTACGCCAGGGATGGGCTGAGAACGTTATGCATGGCAAGAAAGGAACTTTCAGACGAAGAATACAAGGAATGGTTAGTGGAGCACAGGAAAGCGGAAACAGCTCTACATCATCGAGAGAGTAAACTACAAGAGTCGGCAATTAGACTGGAGTGGAACATGGAGCTCCTGGGAGCCACTGGTATTGAGGACCGCTTACAAGATGGTGTCCCTGAGGCCATCGCAAAGCTGAGGGAAGGGGGACTAAAATTGTGGGTGCTGACAGGGGATAAACAGGAGACTGCAGTCAACGTTGGCTATGCCTGTAAACTCCTTGACAATAGCATGCACAAGATCGTCCTGAATGCCAAGACCAAGGACGAGTGTAGCAGTCAGATATATTCCTGGTTGTCCCATCTGAAACTTGACAACACTTCCAGTAGTGTTAGTGGTTCAACAACATTTGCTACGGTTTCTGGTGAAACAGAGAGTCTGCCAGACCAACCGATGGGTTTGATCATCGATGGACGAACCTTGCTCTACGCTCTGGAGAAGCCACTCAATGCCAAGTTCTTACGACTAGCGGCACAGTGTCAGGTCGTGTTGTGTTGTAGAGCTACTCCTATACAGAAGGCTGGAGTGGTGCAGCTGGTCCGTTACGGTCTGAAGGTGATGACCCTTGCCATAGGAGATGGTGCTAACGATGTCAGTATGATACAGATGGCTGATGTGGGTATTGGCATCACGGGTCAGGAAGGCATGCAGGCCGTCATGGCTAGCGACTTCGCTATTGGTAGATTCAAGTTCCTTACTCAACTCCTATTGGTCCATGGACACTGGTGTTACGACAGGATCACCAAAATGTTCCTGTACTTCTTCTACAAGAACGCGATGTTTGTTCTAGTGCTATTCTGGTTCCAGCTCTACAATGGCTTTTCAGGTTCCAATGCCATTGATGACTTATCCTTAATCTTTTTCAACCTTCTCTTCACCGCTGCTCCGCCCATCATCTGTGGCATCCTTGATAAAGACCTGCCTGCCTCTGTTCTTAAGGACAAACCCTACTTATACAAGTCGGGCCAGGAAAGCGAGTTGTATACGCGGAAGTTATTCTGGGTCACCATCCTAGATGCTTTGTATCAGAGTATAGTTCTATTTTTCTCCTGTTTGTTGGTGTTTGAAGGCACTTCTGCTGACGATAGAATGGTTGGTATCACGATGCAGCAGGCAGCTGTCATCCTGGTCAGTCTACACATGGGCCTGGTCACTGCACAATGGACGTGGATTCATCACCTCATACTCTGGGGGAGCGTACTCATCTCGTTCTTGTGGACTCTCTTTTTTGGCATCTTTCAGCCCTCTCACAAGATCTATTTTGTATCGTTTGTCACCATGGCGACCAAGGAGTTCTGGTGTCTGTGTGTACTGATTGCTGCGACGGCTCTCTTGCCGAGGTATTCTCTGACGGCAATAAGGAGAACGCTAAAACCTTCGGAAATAGACAAGGCTCAGATTGAGATGAAGAGCCCACAATACAGCAGTAGAACAGTAAGCGTGGACGCTACAGAGGCCATCAGCGTCACGCCCAAAACACAAACATCCTGCACCTGAATGGCTTCCTTGAAAAACTACTAATGAATTGCCACCAGCTTGCATTCCCGCCAATATGAGCAATGGGTAAATGCGCGTCAACCACGGATATTCCCGCCTTTTTTGTGGTAAAATGACGCTCGCGTCGTCGTTCTCGGTTAGGAAAATAGATAAATTTGAGCATGATAAATATGGCGAGTACTAATAACACGCACCGAGACCAGAAATGGGAACTTACATTCAATGAAGCTTTTGTTCCCATTTCTGGGCTCAGTTTGTGTATATAGATCGATTTCATGTGACGTCATCAAATTGCTAACTTCGAAACTAACTTCGATACAGTTTAGAGCTTACCTAAGCGAGTCTTCACACCAAATTTCATCGGTTTCTTTCACTTTGTTCCGGAGATATCGATGAAGCGATTTGAGTCACGCAACACCAGTCACGTATTTTGAGGAGTCAACTTAGTGCAACTTTGAGCCAAAAACCTTCTAAATTACAAATCAACATGTTAAATAAGTGAATATCTATGCAAATAGATACATTTTATCTCAGAATTCTTGGTAATTGTGGACTTTAATGAAACTTGGTAATCTGGCCGCCATCTTGGTGTACCTTGGAGGTACACCAAGATGGCGGCGCCATACACTTTACTGTAAACATGGCGCACATTTCATCGCTTATATTTTGGGCGGGAAATATCCTAGATTGATAAAACTTGTCAAAAATACGTAATTTGTAGTTCTCTTTCAGAAAAACGCACCTTGATTTTATTTGAATCAGCAATAAAGATTTTTAGGATTCACGTGACCTAAGTGAAATCGATCTATAGTGCTCACCGATAAACATAGTAATTACGCTCTTCTGGCGATTCTTTTCGCTCATTTGTTTTCGGACTGACACGCGCCAAAGGTAGTCTAATCCGAAAACAAATGAGCGAAAAAAAGACACCCAGAAGAACTTCAAACAGACTAGGGTAATATTTACCTTTAAATTAAATAATATTTAAAGAGAAATCTTTGTTATACATTATAAAGCAAAAGTAGTATATAATAGTTATATGTAAAAGAAGAACGTAAACGATAATGGTTTAAGCAAGAGAGCATAACTAATAGGGAATCTCCAGTACCCACGCTTGTGCGATGTCTAATAAAATCTATTTTTGTAACCGGAACCAGCTGAGAAGTGCGCGAGCGTGTAACAATCTCATGGCGGCAAAATATTTTCGCTCCAAGAGATTGTTGTCGTGCGCTCGCACTTGGATTCAGCTGCTTCCGGTTACTAAAAGTATATTCGATTCGACATTATCATCGCACACCGCGTGCTACAAGATTTCCTCTCTTACTTATGGCTCTTAATATCACAAATTATTTATGGCCGTTTATCACTGTAGTTGTGAATAAAAGGGGGTGAATAAAAGGGGGTGAATAAAAGGAGTTGTACA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13246 all species →	Cation_ATPase	Cation transport ATPase (P-type)	Family	Interproscan
PF00702 all species →	Hydrolase	haloacid dehalogenase-like hydrolase	Domain	Interproscan
PF16212 all species →	PhoLip_ATPase_C	Phospholipid-translocating P-type ATPase C-terminal	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR023214 all species →	Homologous_superfamily	HAD superfamily	Interproscan
IPR023298 all species →	Homologous_superfamily	P-type ATPase, transmembrane domain superfamily	Interproscan
IPR001757 all species →	Family	P-type ATPase	Interproscan
IPR023299 all species →	Homologous_superfamily	P-type ATPase, cytoplasmic domain N	Interproscan
IPR032630 all species →	Domain	P-type ATPase, C-terminal	Interproscan
IPR036412 all species →	Homologous_superfamily	HAD-like superfamily	Interproscan
IPR006539 all species →	Family	P-type ATPase, subfamily IV	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24092 all species →	PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0045332 all species →	Biological Process	phospholipid translocation	Interproscan
GO:0140326 all species →	Molecular Function	ATPase-coupled intramembrane lipid transporter activity	Interproscan
GO:0005215 all species →	Molecular Function	transporter activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0016887 all species →	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0000166 all species →	Molecular Function	nucleotide binding	Interproscan
GO:0000287 all species →	Molecular Function	magnesium ion binding	Interproscan
GO:0015914 all species →	Biological Process	phospholipid transport	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K01530	E7.6.2.1; phospholipid-translocating ATPase	EC:7.6.2.1	Enzymes with EC numbers	-	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.