Gene detail

Detailed information of Acti_047046-T2 in Actinernus sp. WN-2022

Genomic Location: ScLC4GM_1370:9294137...9443883
NR annotation: no NCBI-NR hit recorded
Species Actinernus sp. WN-2022 · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Acti_047046-T2

ATGTTAGGCTCACCGACAGTCAATGAATTTTCAATTAAGGATGTTAGTATTGATTCTGATGTCACTGTTATAGACTATGCAGAAAACATAGAAGCCATCCGCGAGATTTATATCATTTTGAAGAATCAACAGTCATATAAACAACGCCTGGAACTTGCCGTTGAGGTTATTAGCAGAGAGGATGCTAAAAGATATGCAAATCAAATAAGAGAAGCAGTAAACCAAAAATTAATTTCACAATATCTTGCAGTATGGGAATGGGCTCTTCTGCACCTCGCATCATATGCTGGTGATGTGGAACTGATTAACATTCTTGTTCACCAAGGAGTAGATGTGAACTCCAAAGACCAATATGGGGTAACTGCTGTGTGGTATGCAGCAACTTCGGAGGTTATGAATACACTTGTCATCCTTGGAGCAGATATAAACGTTTTTAAAGAGAATGTTTTTGACAGTGAGAACCCGTTGATGTACCACTGCAAGAAAGACAGCGTTGATGTTATCAGACTTCTAATAGAAAACGGAGCTGATGTTAATGTAAGAGATATAAATTGTAATAGATCAGCATTGTTTTTTTCGCAGAGTGAATACGTCACTCGCCTTTTGATCGAGTCTGGTGCTGACATCGAAATCATTGATGTTGAAGGTAGGAACTGTCTCTTTTACTCAACAAATGAAAGCATTCTGCTTGCCCTAATTGAAAGTGGCATTGATGTTAATTGCAGGATCAAATTGAGTGGAAAGACAATACTGTTTGGCTTAACAGCTGAAGGGCTCTGCAACATCGTAGGCCTGTTGGTAGAACGTGGCGTGGATATTAAAACTGTTGACAGATATGGCAGGACGTGCCTGTTCTACTTGACTGACCCAGAAGTTGTTCGTGTATTAGTGAGCAATGGAGCAAACATCAATGCTAGGGATAACATGGGCAGAACTCCATTATATCATGCCATACAACATCTGTTCTCAAGCGATTCTGCAAATCTTTTACATACGCTTATTGATTGTGGAGCGACACTAGATGTCAAGGATAACTGCAACGTGAGTGTGTTGTCCTATCTTATTCACTTGATGTTCACTGAATGCGAGATTTACCGGGAGTGTGACATCTGCTCTATAAATAACATTTTAGAAGACCCTACAACAACAGGAGGTCCTAGGCCGGGATATAATCAATATGTGGCAATGGAGGAAGTTGAGGATGAGAGGTTTCTTCGACGTTTCTTGCTGGAGTTGAGTACATCATCCTCCGATAGGTTGAATGAAATATTTCGTTTACTTGCTGCCCTTGGTTTTACATCAGATGATATTTGCAAGGAACTTGTAGATGCTTCCCTGTCCACTTTCATTTCCATTTGGCCAGAGGTTACAGACTTTCTTAATACTTTCAGGGAAATCGTATGTCACTTTGAAAGTGCCTTTGGTTCAAACAAATCGTTCTTGAACAAACTCTTTGTCAAGATAGAGGTCATTGCTTCGCGGGAGCAATCAACCAAACGGAGTAAAGAAATTGAAGTATGTGCAATACTTTTCAATTCAAATGCTTCTCCAAATGCACCCGATCATAATGGGAATACTGCCCTTCACCATGCTGTCCGGTTGCCTTTCCACTATACTGGCCATTTGTCTATAAATTATCTCCATTTACGTTTCCCTTTGCATGATGTACTGCCGGAGATCTTTGATTTACTTGTGGGCCATGGGGCGATAATAAACAGACAAAATCATAGACAAGAAACTCCTCTGCTTTATTTATTTAGAATAATATCAGAAGAAGAAGAAGATAGTATGATTTCAGTTTTAACGGCAAAGTCAACATATCGTTGGCAAGCTCTGATTGACGTTTTACACTTTCTGATAGAGCATGGAGCCAATTTGAATTTGGTCACCAATTTGAATTTGTTCGACAAGTGGAATATGTCCATCAATGAATACTCCTCTGTGTTTCAATTCGCCATTCGTTTATGCTTTAAATCATATTATATGATAGACAATGGTGAGCAAGAAAGAGTTTATGTGCAAAGAGCAGCAATTGAATTATTCATTCTTTTATTTCAAGAATATAGGGCAGGTGGAGAGGCTTTTCGTATCACAGATGACAGAGGAAACACACTGCTTCATATGTGGGCTTCATTTGGATACCAAATGATAGTATCCCATGGCGGATACCAGAAAGTTCAACCAAATGCCAACTTCGAAGAGTTTGTAACTGTATTTGGAAAAATTATTTTAAAGCGGATGAGCGTTAATATAAGAAACTATAAAGCCCAGACGCCTCTTCACTTGGCTAGAACATGTGCTGCTGTTGATCTGTTGTTGAATTCTGGAGCAAATCCTAAAGTAATTGATGAAGCCGGTGATAGTCCATTACATTTGTGGCTTAAACCACAGGCAATATTTGTCAAACCAGTTTGGTATAAAGAAGGTGGCAATATGAAAAGTGGAGGACTAATTCTTTTGCATCCTATAATTAACATCAATTTCAGCATCATTATACAAAATGGATTTGATCCCTGGGTGGTGAATGCCAATGGCGAGTCTATTCTAACCCTTATCCTCAGAAATGAATCTTTCGAGTCTGCAAAGGAACTCTTAGATGTGGGGATTCAAGTTACACGGCCAGGATCCCATCTCACCCTAAGCAACGGAGACTCGCCCTTGCATGTCATTTGTAAAGACAACCACACTCGTAACTTTTGGAAGATTGGCCTCATTGATATTCTTGTAAAGGAAAAAAGACACAATCCCAGTGCCGCAGACAAGAGCAGCAACACACCGCTCCACTATGCCTGCAGACAGGTGACGAGAACAGGAGACTTGAGCAGTGTTCACGGGTCTGTAGTAGAACGCTTACTCCAGTATGGAGCTGACATCCATGTACAAGATAATGAGGGGAAATCATGCTTGGATGTTGCTACAGACATGCCTGAGCTGAAGGAGCTGCTTCTTAAAGAATTTGACATTGAAGATATCCCTGCAATCATTCCATGGTCGTCCAAGTCTGATCGATACAAACCTCTCCTTAATTTAGTTGCTCGATCGAAGAAGGTTCAACACATTGACCTCTACTATTTTTACAAAGAACCGATAGCGTCTGGAACATTTGGGCAGGTGTTTGCTGGTATATGCGAAAAGGATGGTAGAGAAGTAGCAGTGAAACGTATGGAAAAAGCTCGATTAAACAGACCAGAATTCCGCAGAGAAATAAAGAACCTTGTCGAACTCAAGGACTGTGAACAGGTGGTCAAGTATCTTTGTTATCACGAGGATCAACACTTTCTGTACATGGTGCTGGAGCTAATGGAGGGAAGCTTAGAGAAGTATCTTGACGATATCTCCCTGGATCCTCAAAACAGTGTTGAGCTTTGTATGAACATTGTCCTGGGACTCCAATTTCTTCATGCTAATGAAATCATTCACCGTGATATAAAGCCAGCAAACATACTGTTCAAGTACTTCCCACATTTATGCCTGAAGATTGCCGACTTTGGCCTGAGTACCAAAGTTCATACCTGCAGTACTATGACCACCACTGTGATGCACCCAACAGCAGGCACGAGGTGTTGGATGAGCAGTGAGCTGCTGGCTGCTAAAGGTGTATCCGAGCATTCTAAAGCATCTGATGTCTTCGCCTGTGGACTCGTGCTACACTACTTGTTCTACAACAAGAAACATCCCTTCGCTCCATCTGACACAGCAAAGGGTCCAATTGTGATTCAAAATGAAACAGAGAGCAACATACTCCATGGTAAGCTATTGCTAGATCCCAACTTGGATTGCGGGTGCAGAAGTCCTTCTCTCCTTGACACCTCATCACACGAGTTGTGTCACCTGTTGAGAAAGATGCTGCATGCTGACAAGATTCAGCGTCCAACTGCAGAAGAAGTCTTGTCCCACCTGTTCTTCTGGAGCAACGAGAAGAAGGTGAAGTTCCTGGAAGCTGTCGGTAACCAGCCAGAAATCCAATGTTCTCGTTTCAAGCGAAAGGAGGAGGATAAATGCTCTGTAGAGAAAGCCCTGGAGAGTAAACTTGGGAGTCAGTTCACTAAGTGCCCTTGGGATCGATGGAGTCATGTTATGACTAAATTGCACACCGAGATGACGTGTGGTAGACGAGCCTATGAGACTACATCAGCAGTCGCCCTGATAAGGTTCGTACGGAATGCATATGCGCACGTGTCAGACCGGACACGGCCCACTCCATTTCAGGAGCAGCTGCTGCAGCACTTTGTGTTCTTTATTGAATTTCCAATGCTGGTGATTGAAGTGTACGAGGTGGTTACCAACCATGGATGGGATAAGAATCGAAAGGAAGTGGAGTACGCTATAAAGATGAAGTAA

Transcript

Acti_047046-T2

CGATATATGTTCAATTTGCCCAGACTTGAAACATGTTGACTTGACTGGATGCAGTGAGAATACAAAAGATGTAATGTTAGGCTCACCGACAGTCAATGAATTTTCAATTAAGGATGTTAGTATTGATTCTGATGTCACTGTTATAGACTATGCAGAAAACATAGAAGCCATCCGCGAGATTTATATCATTTTGAAGAATCAACAGTCATATAAACAACGCCTGGAACTTGCCGTTGAGGTTATTAGCAGAGAGGATGCTAAAAGATATGCAAATCAAATAAGAGAAGCAGTAAACCAAAAATTAATTTCACAATATCTTGCAGTATGGGAATGGGCTCTTCTGCACCTCGCATCATATGCTGGTGATGTGGAACTGATTAACATTCTTGTTCACCAAGGAGTAGATGTGAACTCCAAAGACCAATATGGGGTAACTGCTGTGTGGTATGCAGCAACTTCGGAGGTTATGAATACACTTGTCATCCTTGGAGCAGATATAAACGTTTTTAAAGAGAATGTTTTTGACAGTGAGAACCCGTTGATGTACCACTGCAAGAAAGACAGCGTTGATGTTATCAGACTTCTAATAGAAAACGGAGCTGATGTTAATGTAAGAGATATAAATTGTAATAGATCAGCATTGTTTTTTTCGCAGAGTGAATACGTCACTCGCCTTTTGATCGAGTCTGGTGCTGACATCGAAATCATTGATGTTGAAGGTAGGAACTGTCTCTTTTACTCAACAAATGAAAGCATTCTGCTTGCCCTAATTGAAAGTGGCATTGATGTTAATTGCAGGATCAAATTGAGTGGAAAGACAATACTGTTTGGCTTAACAGCTGAAGGGCTCTGCAACATCGTAGGCCTGTTGGTAGAACGTGGCGTGGATATTAAAACTGTTGACAGATATGGCAGGACGTGCCTGTTCTACTTGACTGACCCAGAAGTTGTTCGTGTATTAGTGAGCAATGGAGCAAACATCAATGCTAGGGATAACATGGGCAGAACTCCATTATATCATGCCATACAACATCTGTTCTCAAGCGATTCTGCAAATCTTTTACATACGCTTATTGATTGTGGAGCGACACTAGATGTCAAGGATAACTGCAACGTGAGTGTGTTGTCCTATCTTATTCACTTGATGTTCACTGAATGCGAGATTTACCGGGAGTGTGACATCTGCTCTATAAATAACATTTTAGAAGACCCTACAACAACAGGAGGTCCTAGGCCGGGATATAATCAATATGTGGCAATGGAGGAAGTTGAGGATGAGAGGTTTCTTCGACGTTTCTTGCTGGAGTTGAGTACATCATCCTCCGATAGGTTGAATGAAATATTTCGTTTACTTGCTGCCCTTGGTTTTACATCAGATGATATTTGCAAGGAACTTGTAGATGCTTCCCTGTCCACTTTCATTTCCATTTGGCCAGAGGTTACAGACTTTCTTAATACTTTCAGGGAAATCGTATGTCACTTTGAAAGTGCCTTTGGTTCAAACAAATCGTTCTTGAACAAACTCTTTGTCAAGATAGAGGTCATTGCTTCGCGGGAGCAATCAACCAAACGGAGTAAAGAAATTGAAGTATGTGCAATACTTTTCAATTCAAATGCTTCTCCAAATGCACCCGATCATAATGGGAATACTGCCCTTCACCATGCTGTCCGGTTGCCTTTCCACTATACTGGCCATTTGTCTATAAATTATCTCCATTTACGTTTCCCTTTGCATGATGTACTGCCGGAGATCTTTGATTTACTTGTGGGCCATGGGGCGATAATAAACAGACAAAATCATAGACAAGAAACTCCTCTGCTTTATTTATTTAGAATAATATCAGAAGAAGAAGAAGATAGTATGATTTCAGTTTTAACGGCAAAGTCAACATATCGTTGGCAAGCTCTGATTGACGTTTTACACTTTCTGATAGAGCATGGAGCCAATTTGAATTTGGTCACCAATTTGAATTTGTTCGACAAGTGGAATATGTCCATCAATGAATACTCCTCTGTGTTTCAATTCGCCATTCGTTTATGCTTTAAATCATATTATATGATAGACAATGGTGAGCAAGAAAGAGTTTATGTGCAAAGAGCAGCAATTGAATTATTCATTCTTTTATTTCAAGAATATAGGGCAGGTGGAGAGGCTTTTCGTATCACAGATGACAGAGGAAACACACTGCTTCATATGTGGGCTTCATTTGGATACCAAATGATAGTATCCCATGGCGGATACCAGAAAGTTCAACCAAATGCCAACTTCGAAGAGTTTGTAACTGTATTTGGAAAAATTATTTTAAAGCGGATGAGCGTTAATATAAGAAACTATAAAGCCCAGACGCCTCTTCACTTGGCTAGAACATGTGCTGCTGTTGATCTGTTGTTGAATTCTGGAGCAAATCCTAAAGTAATTGATGAAGCCGGTGATAGTCCATTACATTTGTGGCTTAAACCACAGGCAATATTTGTCAAACCAGTTTGGTATAAAGAAGGTGGCAATATGAAAAGTGGAGGACTAATTCTTTTGCATCCTATAATTAACATCAATTTCAGCATCATTATACAAAATGGATTTGATCCCTGGGTGGTGAATGCCAATGGCGAGTCTATTCTAACCCTTATCCTCAGAAATGAATCTTTCGAGTCTGCAAAGGAACTCTTAGATGTGGGGATTCAAGTTACACGGCCAGGATCCCATCTCACCCTAAGCAACGGAGACTCGCCCTTGCATGTCATTTGTAAAGACAACCACACTCGTAACTTTTGGAAGATTGGCCTCATTGATATTCTTGTAAAGGAAAAAAGACACAATCCCAGTGCCGCAGACAAGAGCAGCAACACACCGCTCCACTATGCCTGCAGACAGGTGACGAGAACAGGAGACTTGAGCAGTGTTCACGGGTCTGTAGTAGAACGCTTACTCCAGTATGGAGCTGACATCCATGTACAAGATAATGAGGGGAAATCATGCTTGGATGTTGCTACAGACATGCCTGAGCTGAAGGAGCTGCTTCTTAAAGAATTTGACATTGAAGATATCCCTGCAATCATTCCATGGTCGTCCAAGTCTGATCGATACAAACCTCTCCTTAATTTAGTTGCTCGATCGAAGAAGGTTCAACACATTGACCTCTACTATTTTTACAAAGAACCGATAGCGTCTGGAACATTTGGGCAGGTGTTTGCTGGTATATGCGAAAAGGATGGTAGAGAAGTAGCAGTGAAACGTATGGAAAAAGCTCGATTAAACAGACCAGAATTCCGCAGAGAAATAAAGAACCTTGTCGAACTCAAGGACTGTGAACAGGTGGTCAAGTATCTTTGTTATCACGAGGATCAACACTTTCTGTACATGGTGCTGGAGCTAATGGAGGGAAGCTTAGAGAAGTATCTTGACGATATCTCCCTGGATCCTCAAAACAGTGTTGAGCTTTGTATGAACATTGTCCTGGGACTCCAATTTCTTCATGCTAATGAAATCATTCACCGTGATATAAAGCCAGCAAACATACTGTTCAAGTACTTCCCACATTTATGCCTGAAGATTGCCGACTTTGGCCTGAGTACCAAAGTTCATACCTGCAGTACTATGACCACCACTGTGATGCACCCAACAGCAGGCACGAGGTGTTGGATGAGCAGTGAGCTGCTGGCTGCTAAAGGTGTATCCGAGCATTCTAAAGCATCTGATGTCTTCGCCTGTGGACTCGTGCTACACTACTTGTTCTACAACAAGAAACATCCCTTCGCTCCATCTGACACAGCAAAGGGTCCAATTGTGATTCAAAATGAAACAGAGAGCAACATACTCCATGGTAAGCTATTGCTAGATCCCAACTTGGATTGCGGGTGCAGAAGTCCTTCTCTCCTTGACACCTCATCACACGAGTTGTGTCACCTGTTGAGAAAGATGCTGCATGCTGACAAGATTCAGCGTCCAACTGCAGAAGAAGTCTTGTCCCACCTGTTCTTCTGGAGCAACGAGAAGAAGGTGAAGTTCCTGGAAGCTGTCGGTAACCAGCCAGAAATCCAATGTTCTCGTTTCAAGCGAAAGGAGGAGGATAAATGCTCTGTAGAGAAAGCCCTGGAGAGTAAACTTGGGAGTCAGTTCACTAAGTGCCCTTGGGATCGATGGAGTCATGTTATGACTAAATTGCACACCGAGATGACGTGTGGTAGACGAGCCTATGAGACTACATCAGCAGTCGCCCTGATAAGGTTCGTACGGAATGCATATGCGCACGTGTCAGACCGGACACGGCCCACTCCATTTCAGGAGCAGCTGCTGCAGCACTTTGTGTTCTTTATTGAATTTCCAATGCTGGTGATTGAAGTGTACGAGGTGGTTACCAACCATGGATGGGATAAGAATCGAAAGGAAGTGGAGTACGCTATAAAGATGAAGTAAGGACTGTATTAATCCAGCTATTGTAAATAATCAGTTACGGTACTTGGCTAGGTTAAACTGGTTTCCTGCATTACCAACCCAACGGTAATTGTTTTTCTTTGCTTTTGCTATAATATATTTAAGTTGATCTCGTTTGAAAACCCTTTCTAAATGAGGGGGATGACATTTTCTGTTTGTCAGTATGTCATCTCATTCTAGAGATATTCAGGTGTTTACAATATGCAAACGAGATTAAATTTGACGTACATGTAGGAACGTGTACTCAGCCTGGAGACAAAAAAAAATATGAAGAATATCTCTTTGAATACACGTTAAAAACAATTAAAATCGTGCACACGTATGGTACTAAGAAAAATGCACATCATTGTGCAAATCATGACGTTGCCATGGAAACACTCTTGGCCTCGGACTCCTTTCACACGTTTCTACATCATAGGTCATCTCATTTGCATATTGTAAAAACCTGAATATCTCTAGAATGAGATGTACTATTTCTCAAACTCGTTCTGCGTGTTTCATCAAGGGTTACAAATTCCAAGAAAGCAATGGATACTGAGGGGTTCAGGCTTTTGAGGTGTTTGGAACCCTGATGAAACGAGCAGAACGAGTTTGAGAAATTGCCTCTCGAACAATACCTGTATTCATAGATCATTAGATCATTGTTTGTCTGGTATTTTGCTGCATATAGTTATTGATTACAAGGATTGTCATTGTTATTTTCTATGGTTCATTTCAACAAGCATTCCTATAGTGTAGTGGGCATGTCAGAGGACTAGAAGTAGCTGTATACAGTTATTGATCACAAG

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00023 all species →	Ank	Ankyrin repeat	Repeat	Interproscan
PF00069 all species →	Pkinase	Protein kinase domain	Domain	Interproscan
PF12796 all species →	Ank_2	Ankyrin repeats (3 copies)	Repeat	Interproscan
PF06479 all species →	Ribonuc_2-5A	Ribonuclease 2-5A	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR038357 all species →	Homologous_superfamily	KEN domain superfamily	Interproscan
IPR002110 all species →	Repeat	Ankyrin repeat	Interproscan
IPR008271 all species →	Active_site	Serine/threonine-protein kinase, active site	Interproscan
IPR000719 all species →	Domain	Protein kinase domain	Interproscan
IPR036770 all species →	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan
IPR045133 all species →	Family	Serine/threonine-protein kinase/endoribonuclease IRE1/2-like	Interproscan
IPR010513 all species →	Domain	KEN domain	Interproscan
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13954 all species →	IRE1-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0004672 all species →	Molecular Function	protein kinase activity	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0004521 all species →	Molecular Function	RNA endonuclease activity	Interproscan
GO:0004674 all species →	Molecular Function	protein serine/threonine kinase activity	Interproscan
GO:0030968 all species →	Biological Process	endoplasmic reticulum unfolded protein response	Interproscan
GO:0036498 all species →	Biological Process	IRE1-mediated unfolded protein response	Interproscan
GO:0051082 all species →	Molecular Function	unfolded protein binding	Interproscan
GO:0070059 all species →	Biological Process	intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress	Interproscan
GO:1990604 all species →	Cellular Component	IRE1-TRAF2-ASK1 complex	Interproscan
GO:0004540 all species →	Molecular Function	RNA nuclease activity	Interproscan
GO:0006397 all species →	Biological Process	mRNA processing	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for Acti_047046-T2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.