Gene detail

Detailed information of Actinostola_13232 in Actinostola sp. cb2023

Genomic Location: scaffold27_size1060436:162683...165526
NR annotation: no NCBI-NR hit recorded
Species Actinostola sp. cb2023 · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00646 all species →	F-box	F-box domain	Domain	Interproscan
PF10442 all species →	FIST_C	FIST C domain	Domain	Interproscan
PF08495 all species →	FIST	FIST N domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001810 all species →	Domain	F-box domain	Interproscan
IPR036047 all species →	Homologous_superfamily	F-box-like domain superfamily	Interproscan
IPR019494 all species →	Domain	FIST, C-domain	Interproscan
IPR013702 all species →	Domain	FIST domain, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14939 all species →	F-BOX ONLY PROTEIN 22	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0000209 all species →	Biological Process	protein polyubiquitination	Interproscan
GO:0032436 all species →	Biological Process	positive regulation of proteasomal ubiquitin-dependent protein catabolic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K10302	FBXO22; F-box protein 22	-	Ubiquitin system	ko04121	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.