Genomic Location: scaffold_1:5523039...5541100
NR annotation: XP_029203757.2, LOW QUALITY PROTEIN: echinoderm microtubule-associated protein-like 2 [Acropora millepora]
| CDS | ||||
| Ahemp_000378-T1 | ||||
| Transcript |
| Ahemp_000378-T1 |
| Protein |
| Ahemp_000378-T1 |
| Uniprot term | Description | |||
|---|---|---|---|---|
| Q4V8C3 | Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2 | |||
| Q05BC3 | Echinoderm microtubule-associated protein-like 1 OS=Mus musculus OX=10090 GN=Eml1 PE=1 SV=1 | |||
| Q26613 | 77 kDa echinoderm microtubule-associated protein OS=Strongylocentrotus purpuratus OX=7668 GN=EMAP PE=2 SV=1 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | UBD|Other|Beta-prp |
| Ubiquitin Family | E3|E3 adaptor Cullin RING|CDC20 |
| Ubiquitin Family | E3|E3 adaptor Cullin RING|DWD |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00400 | WD40 | WD domain, G-beta repeat | Repeat | Interproscan |
| PF13202 | EF-hand_5 | EF hand | Domain | Interproscan |
| PF03451 | HELP | HELP motif | Repeat | Interproscan |
| PF20742 | DUF5580_M | Family of unknown function (DUF5580) middle domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR015943 | Homologous_superfamily | WD40/YVTN repeat-like-containing domain superfamily | Interproscan |
| IPR001680 | Repeat | WD40 repeat | Interproscan |
| IPR002048 | Domain | EF-hand domain | Interproscan |
| IPR018247 | Binding_site | EF-Hand 1, calcium-binding site | Interproscan |
| IPR005108 | Conserved_site | HELP motif | Interproscan |
| IPR049246 | Domain | DUF5580, middle domain | Interproscan |
| IPR011992 | Homologous_superfamily | EF-hand domain pair | Interproscan |
| IPR050630 | Family | WD repeat Echinoderm Microtubule-associated Protein-like | Interproscan |
| IPR011047 | Homologous_superfamily | Quinoprotein alcohol dehydrogenase-like superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR13720 | WD-40 REPEAT PROTEIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0005509 | Molecular Function | calcium ion binding | Interproscan |
| GO:0000226 | Biological Process | microtubule cytoskeleton organization | Interproscan |
| GO:0008017 | Molecular Function | microtubule binding | Interproscan |
| GO:0072686 | Cellular Component | mitotic spindle | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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