Gene detail

Detailed information of Ahemp_001340-T1 in Acropora hemprichii

Genomic Location: scaffold_2:7936428...7941759
NR annotation: XP_029203671.1, E3 ubiquitin-protein ligase MARCHF5-like isoform X1 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Gene family

Uniprot term	Description
Q5ZJ41	E3 ubiquitin-protein ligase MARCHF5 OS=Gallus gallus OX=9031 GN=MARCHF5 PE=2 SV=1
Q6GM44	E3 ubiquitin-protein ligase MARCHF5 OS=Xenopus laevis OX=8355 GN=marchf5 PE=2 SV=1
Q3ZC24	E3 ubiquitin-protein ligase MARCHF5 OS=Bos taurus OX=9913 GN=MARCHF5 PE=2 SV=1

Gene family	Subfamily
Ubiquitin Family	E3\|E3 activity RING\|PHD

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12906	RINGv	RING-variant domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR011016	Domain	Zinc finger, RING-CH-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46283	E3 UBIQUITIN-PROTEIN LIGASE MARCH5	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0000209	Biological Process	protein polyubiquitination	Interproscan
GO:0005741	Cellular Component	mitochondrial outer membrane	Interproscan
GO:0061630	Molecular Function	ubiquitin protein ligase activity	Interproscan
GO:0090140	Biological Process	regulation of mitochondrial fission	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K10660	MARCH5; E3 ubiquitin-protein ligase MARCH5	EC:2.3.2.27	Ubiquitin system	ko04121	deepkoala