Detailed information of Ahemp_001388-T1 in Acropora hemprichii

Genomic Location: scaffold_3:186152...200320
NR annotation: XP_044178296.1, polycystin-1-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q7TN88Polycystin-1-like protein 2 OS=Mus musculus OX=10090 GN=Pkd1l2 PE=2 SV=1
Q2EG98Polycystin-1-like protein 3 OS=Mus musculus OX=10090 GN=Pkd1l3 PE=1 SV=3
Q7Z442Polycystin-1-like protein 2 OS=Homo sapiens OX=9606 GN=PKD1L2 PE=1 SV=5

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01825GPSGPCR proteolysis site, GPS, motif MotifInterproscan
PF02010REJREJ domainFamilyInterproscan
PF08016PKD_channelPolycystin cation channelFamilyInterproscan
PF20519Polycystin_domPolycystin domainDomainInterproscan
PF01477PLATPLAT/LH2 domainDomainInterproscan
PF12947EGF_3EGF domainDomainInterproscan
PF07645EGF_CACalcium-binding EGF domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000203Conserved_siteGPS motifInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR002859DomainPKD/REJ-like domainInterproscan
IPR014010DomainREJ domainInterproscan
IPR036392Homologous_superfamilyPLAT/LH2 domain superfamilyInterproscan
IPR051223FamilyPolycystinInterproscan
IPR013122DomainPolycystin cation channel, PKD1/PKD2Interproscan
IPR046338Homologous_superfamilyGAIN domain superfamilyInterproscan
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR046791DomainPolycystin domainInterproscan
IPR001024DomainPLAT/LH2 domainInterproscan
IPR003915FamilyPolycystic kidney disease type 2 proteinInterproscan
IPR024731DomainEGF domainInterproscan
IPR049883DomainNOTCH1 EGF-like calcium-binding domainInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR000421DomainCoagulation factor 5/8 C-terminal domainInterproscan
IPR009030Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10877POLYCYSTIN FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005262Molecular Functioncalcium channel activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0050982Biological Processdetection of mechanical stimulusInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K04988PKD1L2; polycystin 1L2-Ion channelsko04040deepkoala

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