Genomic Location: scaffold_3:2075380...2104579
NR annotation: XP_029201075.2, polycomb protein Scm-like isoform X1 [Acropora millepora]
| CDS | |||||
| Ahemp_001564-T1 | |||||
| Transcript |
| Ahemp_001564-T1 |
| Protein |
| Ahemp_001564-T1 |
| Uniprot term | Description | ||||
|---|---|---|---|---|---|
| Q96GD3 | Polycomb protein SCMH1 OS=Homo sapiens OX=9606 GN=SCMH1 PE=1 SV=1 | ||||
| Q8K214 | Polycomb protein SCMH1 OS=Mus musculus OX=10090 GN=Scmh1 PE=1 SV=1 | ||||
| Q9UQR0 | Sex comb on midleg-like protein 2 OS=Homo sapiens OX=9606 GN=SCML2 PE=1 SV=1 |
| Gene family | Subfamily |
|---|---|
| Transcription Factors Family | Fork_head |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF12140 | SLED | SLED domain | Domain | Interproscan |
| PF00250 | Forkhead | Forkhead domain | Domain | Interproscan |
| PF00536 | SAM_1 | SAM domain (Sterile alpha motif) | Domain | Interproscan |
| PF02820 | MBT | mbt repeat | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001660 | Domain | Sterile alpha motif domain | Interproscan |
| IPR050548 | Family | Polycomb group and chromatin remodeling factors | Interproscan |
| IPR004092 | Repeat | Mbt repeat | Interproscan |
| IPR038348 | Homologous_superfamily | SLED domain superfamily | Interproscan |
| IPR001766 | Domain | Fork head domain | Interproscan |
| IPR021987 | Domain | SLED domain | Interproscan |
| IPR006594 | Conserved_site | LIS1 homology motif | Interproscan |
| IPR036388 | Homologous_superfamily | Winged helix-like DNA-binding domain superfamily | Interproscan |
| IPR013761 | Homologous_superfamily | Sterile alpha motif/pointed domain superfamily | Interproscan |
| IPR030456 | Conserved_site | Fork head domain conserved site 2 | Interproscan |
| IPR036390 | Homologous_superfamily | Winged helix DNA-binding domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12247 | POLYCOMB GROUP PROTEIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0006355 | Biological Process | regulation of DNA-templated transcription | Interproscan |
| GO:0003700 | Molecular Function | DNA-binding transcription factor activity | Interproscan |
| GO:0043565 | Molecular Function | sequence-specific DNA binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K11461 | SCMH1; polycomb protein SCMH1 | - | Chromosome and associated proteins | ko03036 | deepkoala |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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