Detailed information of Ahemp_001806-T1 in Acropora hemprichii

Genomic Location: scaffold_3:5457198...5483420
NR annotation: XP_044172986.1, ralBP1-associated Eps domain-containing protein 1-like isoform X2 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9CR26Vacuolar protein sorting-associated protein VTA1 homolog OS=Mus musculus OX=10090 GN=Vta1 PE=1 SV=1
Q32L63Vacuolar protein sorting-associated protein VTA1 homolog OS=Bos taurus OX=9913 GN=VTA1 PE=2 SV=1
Q9NP79Vacuolar protein sorting-associated protein VTA1 homolog OS=Homo sapiens OX=9606 GN=VTA1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04402SIMPLProtein of unknown function (DUF541)FamilyInterproscan
PF01120Alpha_L_fucosAlpha-L-fucosidaseDomainInterproscan
PF12763EF-hand_4Cytoskeletal-regulatory complex EF handFamilyInterproscan
PF18097Vta1_CVta1 C-terminal domainDomainInterproscan
PF04652Vta1Vta1 likeFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR018247Binding_siteEF-Hand 1, calcium-binding siteInterproscan
IPR044538FamilyVacuolar protein sorting-associated protein Vta1-likeInterproscan
IPR000261DomainEH domainInterproscan
IPR023175Homologous_superfamilyVta1/Callose synthase, N-terminal domain superfamilyInterproscan
IPR002048DomainEF-hand domainInterproscan
IPR007497FamilyInterleukin-1 receptor-associated kinase 1-binding protein 1/DUF541Interproscan
IPR017853Homologous_superfamilyGlycoside hydrolase superfamilyInterproscan
IPR000933FamilyGlycoside hydrolase, family 29Interproscan
IPR011992Homologous_superfamilyEF-hand domain pairInterproscan
IPR041212DomainVta1, C-terminalInterproscan
IPR039431DomainVta1/callose synthase, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46009VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VTA1 HOMOLOGInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005771Cellular Componentmultivesicular bodyInterproscan
GO:0032511Biological Processlate endosome to vacuole transport via multivesicular body sorting pathwayInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0004560Molecular Functionalpha-L-fucosidase activityInterproscan
GO:0005975Biological Processcarbohydrate metabolic processInterproscan

TOP