Gene detail

Detailed information of Ahemp_001936-T1 in Acropora hemprichii

Genomic Location: scaffold_3:7141421...7147427
NR annotation: XP_015756929.1, PREDICTED: cytoplasmic tRNA 2-thiolation protein 1-like [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q5FW05	Cytoplasmic tRNA 2-thiolation protein 1 OS=Xenopus tropicalis OX=8364 GN=ctu1 PE=2 SV=1
Q05AW7	Cytoplasmic tRNA 2-thiolation protein 1 OS=Xenopus laevis OX=8355 GN=ctu1 PE=2 SV=1
Q803X1	Cytoplasmic tRNA 2-thiolation protein 1 OS=Danio rerio OX=7955 GN=ctu1 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01171	ATP_bind_3	PP-loop family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011063	Domain	tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal	Interproscan
IPR014729	Homologous_superfamily	Rossmann-like alpha/beta/alpha sandwich fold	Interproscan
IPR035107	Family	tRNA thiolation protein, TtcA/Ctu1 type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11807	ATPASES OF THE PP SUPERFAMILY-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0008033	Biological Process	tRNA processing	Interproscan
GO:0000049	Molecular Function	tRNA binding	Interproscan
GO:0002143	Biological Process	tRNA wobble position uridine thiolation	Interproscan
GO:0002144	Cellular Component	cytosolic tRNA wobble base thiouridylase complex	Interproscan
GO:0005739	Cellular Component	mitochondrion	Interproscan