Detailed information of Ahemp_001962-T1 in Acropora hemprichii

Genomic Location: scaffold_3:7466049...7487537
NR annotation: XP_029196707.2, LOW QUALITY PROTEIN: afadin-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P55196Afadin OS=Homo sapiens OX=9606 GN=AFDN PE=1 SV=3
O35889Afadin OS=Rattus norvegicus OX=10116 GN=Afdn PE=1 SV=1
Q9QZQ1Afadin OS=Mus musculus OX=10090 GN=Afdn PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01843DILDIL domainRepeatInterproscan
PF00595PDZPDZ domainDomainInterproscan
PF00498FHAFHA domainFamilyInterproscan
PF00788RARas association (RalGDS/AF-6) domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036034Homologous_superfamilyPDZ superfamilyInterproscan
IPR037977DomainAfadin, cargo binding domainInterproscan
IPR028842FamilyAfadinInterproscan
IPR001478DomainPDZ domainInterproscan
IPR029071Homologous_superfamilyUbiquitin-like domain superfamilyInterproscan
IPR002710DomainDilute domainInterproscan
IPR000159DomainRas-associating domainInterproscan
IPR008984Homologous_superfamilySMAD/FHA domain superfamilyInterproscan
IPR000253DomainForkhead-associated (FHA) domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10398AFADINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005911Cellular Componentcell-cell junctionInterproscan
GO:0007165Biological Processsignal transductionInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K05702AF6, MLLT4; afadin-Leukocyte transendothelial migrationko04670deepkoala

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