Detailed information of Ahemp_002246-T1 in Acropora hemprichii

Genomic Location: scaffold_4:3257588...3283579
NR annotation: XP_029195092.2, FACT complex subunit SPT16-like isoform X2 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9Y5B9FACT complex subunit SPT16 OS=Homo sapiens OX=9606 GN=SUPT16H PE=1 SV=1
Q920B9FACT complex subunit SPT16 OS=Mus musculus OX=10090 GN=Supt16h PE=1 SV=2
Q9W603FACT complex subunit SPT16 OS=Xenopus laevis OX=8355 GN=supt16h PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08512Rttp106-like_middleHistone chaperone Rttp106-like, middle domainDomainInterproscan
PF00557Peptidase_M24Metallopeptidase family M24DomainInterproscan
PF21091SPT16_CFACT complex subunit SPT16, C-terminal domainDomainInterproscan
PF08644SPT16FACT complex subunit (SPT16/CDC68)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013719DomainHistone chaperone RTT106/FACT complex subunit SPT16-like, middle domainInterproscan
IPR013953DomainFACT complex subunit Spt16 domainInterproscan
IPR011993Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR040258FamilyFACT complex subunit Spt16Interproscan
IPR000994DomainPeptidase M24Interproscan
IPR048969DomainFACT complex subunit SPT16, C-terminal domainInterproscan
IPR036005Homologous_superfamilyCreatinase/aminopeptidase-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13980CDC68 RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006368Biological Processtranscription elongation by RNA polymerase IIInterproscan
GO:0031491Molecular Functionnucleosome bindingInterproscan
GO:0035101Cellular ComponentFACT complexInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K25639SUPT16H, SPT16; FACT complex subunit SPT16-Chromosome and associated proteinsko03036deepkoala

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