Detailed information of Ahemp_002330-T1 in Acropora hemprichii

Genomic Location: scaffold_4:4815752...4837608
NR annotation: XP_029202253.2, uncharacterized protein PB18E9.04c-like isoform X1 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
O60934Nibrin OS=Homo sapiens OX=9606 GN=NBN PE=1 SV=1
Q5RCV3Nibrin OS=Pongo abelii OX=9601 GN=NBN PE=2 SV=2
Q9JIL9Nibrin OS=Rattus norvegicus OX=10116 GN=Nbn PE=1 SV=2
Gene familySubfamily
Transcription Factors FamilyHMG

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00505HMG_boxHMG (high mobility group) boxDomainInterproscan
PF16508NIBRIN_BRCT_IISecond BRCT domain on Nijmegen syndrome breakage proteinDomainInterproscan
PF08599Nbs1_CDNA damage repair protein Nbs1FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR043014Homologous_superfamilyNibrin, second BRCT domain superfamilyInterproscan
IPR036420Homologous_superfamilyBRCT domain superfamilyInterproscan
IPR013908DomainNibrin, C-terminalInterproscan
IPR009071DomainHigh mobility group box domainInterproscan
IPR040227FamilyNibrin-relatedInterproscan
IPR036910Homologous_superfamilyHigh mobility group box domain superfamilyInterproscan
IPR032429DomainNibrin, second BRCT domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12162NIBRIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000724Biological Processdouble-strand break repair via homologous recombinationInterproscan
GO:0003684Molecular Functiondamaged DNA bindingInterproscan
GO:0006302Biological Processdouble-strand break repairInterproscan
GO:0007095Biological Processmitotic G2 DNA damage checkpoint signalingInterproscan
GO:0030870Cellular ComponentMre11 complexInterproscan
GO:0032508Biological ProcessDNA duplex unwindingInterproscan

TOP