Detailed information of Ahemp_003530-T1 in Acropora hemprichii

Genomic Location: scaffold_7:3372089...3399313
NR annotation: XP_044174879.1, LOW QUALITY PROTEIN: DNA-binding protein SMUBP-2-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P38935DNA-binding protein SMUBP-2 OS=Homo sapiens OX=9606 GN=IGHMBP2 PE=1 SV=3
Q60560DNA-binding protein SMUBP-2 OS=Mesocricetus auratus OX=10036 GN=IGHMBP2 PE=1 SV=1
P40694DNA-binding protein SMUBP-2 OS=Mus musculus OX=10090 GN=Ighmbp2 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13087AAA_12AAA domainDomainInterproscan
PF21138SMUBP-2_HCS1_1BHelicase SMUBP-2/HCS1, 1B domainDomainInterproscan
PF13086AAA_11AAA domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR041679DomainDNA2/NAM7 helicase-like, C-terminalInterproscan
IPR048761DomainHelicase SMUBP-2/HCS1, 1B domainInterproscan
IPR047187DomainUpf1-like, C-terminal helicase domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR041677DomainDNA2/NAM7 helicase, helicase domainInterproscan
IPR003593DomainAAA+ ATPase domainInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR050534FamilyCoronaviruses polyprotein 1abInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43788DNA2/NAM7 HELICASE FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0004386Molecular Functionhelicase activityInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0043139Molecular Function5'-3' DNA helicase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K19783HCS1; DNA polymerase alpha-associated DNA helicase AEC:5.6.2.3
DNA replication proteinsko03032deepkoala

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