Gene detail

Detailed information of Ahemp_003706-T1 in Acropora hemprichii

Genomic Location: scaffold_8:710756...723046
NR annotation: XP_015763700.1, PREDICTED: receptor-type tyrosine-protein phosphatase T-like [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Ahemp_003706-T1

TTTTACCTTGGCTTTTCGCGTGTAACCGCTGTAACCACGGGAAACTAAAAACCCAAGTGTGATGTACCACGGGAAAATTTACCATGGGAAAAGCCATTTACCGTGGTGTGTGTAACCGCACCTATAGTATCACTCTTTGTAGTGGTTGGACAAGTATTCCATTTATGCTTCTTTTTTTCTTTTTCTTTTCTTTTTTTTTTCTTTAGACTTATGACGAGGAGACGATGTGTTACATTGCTACTCAAGGTCCCACATCTGTGACAGTGAGCGACTTTTGGCGGATGATCTGGCAAGAGAAATGCTCAGTTATTGTTATGCTTACCAACCTAGTTGAACAAGGAAAGAAAAAATGTGAGCAGTATTGGCCAAACGATACTTCTGAATATGGCGGCATTAAAGTTACTTTGCTCAAGACAGAAAACTTTGCAAATTACGTCATTCGTTCGTTTTTTGTTGTTAAGGGCTCTGAGAAGCGCGACTTATTCCAATTCCATTACACAACATGGCCCGACAGAGGTGTACCTCAAAATTCTACTGCTTTGCTAGCATTCAGATGGAAAGTGTACGCTCGGCAACAATTGACTGAAGGGCCACTTGTTGTACACTGCAGCGCCGGTGTTGGTCGAACAGGAACCTACATTGGCATCGATGCCATGTTGGAATGTGCTAAAGACAGGGGCAACGTGTTTATTCAAAATTACGTGGAGGTCATGCGCAGACAGCGTCCTTATATGGTTCAGAAAGAGGAGCAGTATGTGTTTTTGCATGAAGCCGTGATGGTGGGATTAGCTTGTGGAAATACAGAAGTTTCTTCCGAAGATTTGCTGCTCAGAATGAACAAACTTGCGAGAGTTAATAAGTCTTCCAATCAAACGGGATATCAAGAAGAATTTCAGCGATTACAACGAATCTGCAAATTTGAAAGCCAAGGTGCGCCTTCGACTGCTGCATTAAAACCAAGCAACCGCACGAAGAACAGATATATTAATTACCTACCAGTGGATACTGCTCGGGTTATCTTGAAGTCGTCCAAAGAAGACAGGGATTACATCAACGCTTCTTTTGTTGACGGCAATGTTCAGCGTGATGCATACATCTTGACGCAGGCGCCATTGTCTAACACAACTGAAGACTTCTGGCGCATGGTGTCGCAATATGATGTTAGTACAGTAGTGATGCTCAACGATTTAACAAAAGAAAGCGAGAGTTACCCTCAGTACTGGCCATCGGAAGGGGTCGTCAAATATGGAGATATTACTCTGAAATTCCTAGCAAAAAAGAAAACCGAGACCAGTACAATCACGAAGCTCAGTGTATTTGATGCAGTGCCTCCAAAAAATACATCAACTATACAGCATCTGCAGTTCACAGGCTGGAGTCACCCAAACTCGCCACCGGATCCCCAAGAAATCCTTGAACTGGTCACTGATATTGAAAAATCCCAGCAAAACACAGGAAATGGCATCATTGTTTTACAATGCAGTGATGGTGTTGGTCGCAGTGCCACCGTGGCAGCCATTATGTCAGCGATTGAGAAAGTCAAAACTGAACAGACTGTTGACATATTTCAGACTATTAAACTGCTTCGAGTCAAGCGGCCTTCTGCTGTTACCACATGGGAGCAATACAAACTTTGCTACAGTACAATTTCTGCATTTCTGGATTCATTCGAAACCTACTCCAACTTCGCATAATGTTACCAAAAGTTTTTCCTCTCTGCAGTGCAAAGTAATGACTCAAAGAGATGTATTTCAAACTCAAAAACCTAAAATCTGAATTGACATTAACTACATAGGCAGCATAATACGTTGTGCTGCCTTTGCATTTCGACATTTCGAGGCAATTTTATGAATTTTATTAAGTAAATTCCGACATTGTTGATGATGGCCCATCATCTAAACGGTTTAGATTTCGCAATTTGACAAGAATTTCTAAAAATCTTGGTGTTGATCTCACAAAGCTACCAAAGTGCATCCCGAAATTTGAGAATCACTCCCCCATTAGGATTTAGGGACAAAAAAACACTTAATGAGGATGGAAGTAAGCCAGTCTGATGTTTCAACATATCGCATATCCATTCATTTCAACGGCTCACGGTGATCAAGAAAACATCTTCAAATGTAAAGGAAAAGGTCCGCTCAGTTGAGTGAAGTAGTGTTTCTTGTCTTACAAAAACGCTTTACCCTTTTTACAAAAATCTCAAGAAGTACCTCCTGAGAAAAACCACGAGTTCACCGCGTTGCCGACTGGTTTTCACTTATACTTTCCATGTTGTAAATAAAGAATTATATTTTGAATAAATTCTAATAAAATATTGACGC

Protein

Uniprot

Uniprot term	Description
P18433	Receptor-type tyrosine-protein phosphatase alpha OS=Homo sapiens OX=9606 GN=PTPRA PE=1 SV=3
P18052	Receptor-type tyrosine-protein phosphatase alpha OS=Mus musculus OX=10090 GN=Ptpra PE=1 SV=3
F1NWE3	Receptor-type tyrosine-protein phosphatase S OS=Gallus gallus OX=9031 GN=PTPRS PE=1 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00102	Y_phosphatase	Protein-tyrosine phosphatase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029021	Homologous_superfamily	Protein-tyrosine phosphatase-like	Interproscan
IPR016130	Active_site	Protein-tyrosine phosphatase, active site	Interproscan
IPR000242	Domain	Tyrosine-specific protein phosphatase, PTPase domain	Interproscan
IPR003595	Domain	Protein-tyrosine phosphatase, catalytic	Interproscan
IPR000387	Domain	Tyrosine-specific protein phosphatases domain	Interproscan
IPR050348	Family	Protein-Tyrosine Phosphatase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19134	RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016311	Biological Process	dephosphorylation	Interproscan
GO:0004725	Molecular Function	protein tyrosine phosphatase activity	Interproscan
GO:0006470	Biological Process	protein dephosphorylation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K18033	PTPRE; receptor-type tyrosine-protein phosphatase epsilon	EC:3.1.3.48	Protein phosphatases and associated proteins	ko01009	deepkoala