Detailed information of Ahemp_004221-T1 in Acropora hemprichii

Genomic Location: scaffold_9:2800278...2829748
NR annotation: XP_044180866.1, LOW QUALITY PROTEIN: uncharacterized protein LOC122962028 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q20191Zinc metalloproteinase nas-13 OS=Caenorhabditis elegans OX=6239 GN=nas-13 PE=2 SV=5
P55112Zinc metalloproteinase nas-4 OS=Caenorhabditis elegans OX=6239 GN=nas-4 PE=2 SV=4
Q9U3S9Zinc metalloproteinase nas-6 OS=Caenorhabditis elegans OX=6239 GN=nas-6 PE=2 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01400AstacinAstacin (Peptidase family M12A)DomainInterproscan
PF00629MAMMAM domain, meprin/A5/muDomainInterproscan
PF00791ZU5ZU5 domainFamilyInterproscan
PF13424TPR_12Tetratricopeptide repeatRepeatInterproscan
PF00531DeathDeath domainDomainInterproscan
PF00090TSP_1Thrombospondin type 1 domainDomainInterproscan
PF01549ShKShK domain-likeDomainInterproscan
PF13181TPR_8Tetratricopeptide repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000998DomainMAM domainInterproscan
IPR019734RepeatTetratricopeptide repeatInterproscan
IPR003582DomainShKT domainInterproscan
IPR001506DomainPeptidase M12AInterproscan
IPR034035DomainAstacin-like metallopeptidase domainInterproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR000906DomainZU5 domainInterproscan
IPR011029Homologous_superfamilyDeath-like domain superfamilyInterproscan
IPR006026DomainPeptidase, metallopeptidaseInterproscan
IPR000488DomainDeath domainInterproscan
IPR024079Homologous_superfamilyMetallopeptidase, catalytic domain superfamilyInterproscan
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10127DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAININGInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0004222Molecular Functionmetalloendopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0008237Molecular Functionmetallopeptidase activityInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0007165Biological Processsignal transductionInterproscan

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