Gene detail

Detailed information of Ahemp_005046-T1 in Acropora hemprichii

Genomic Location: scaffold_12:1583792...1604772
NR annotation: XP_044163222.1, uncharacterized protein LOC122947730 isoform X1 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Ahemp_005046-T1

ATGGCCGAAAAGCGTGCTGAATTGTCCTGCCTCTATTACGGTTTAACCAGTTTTTTGGTTCTGTTCTGTGCGGTAGAAGTGGACTCTCAGCGCTCGAGGCTAGCAAGGATCGCTATAAATGCACGTTGCACTGCGAACTGTTTAACCTTGTTCAGCACCAAGAACAATGCCTCTGAGAACATCTGTCAAACCACAGCTTGCCAAGACTGTCTGGTTCCTTGTGACAAAACCTTTCGTAATGAAACCTTGTGCATTCACAGCTGTAGGTCATCAAGTAGCTGCGAGGCAAGCTGCAGATTTATTGGGCATTTGACAACAACGTCGCTTTTTAATGGAGATGGTGCACCAGTGCCACTCGTAAGAACACCAACTGTAACGAAAAAGACCTTGACCTCGATTCATCTGGAATGGGATGCGGTGAAGCCTAATAAGGGAACACCTGTGTATTTGATTAGAATGACATATACTGGTGACTGGCCGACATCTTGCCAGAGTCCTGGAAAATGCGAGAGGTCGTATACCTTTGATCATGTATTCACAGTTCCTCGTGGTAGCCTGACGACCAGCGAACTTTGTATTAGAGTACCAAATTATGGACTGGATAGAGGAGCAGGTCGCTATAGTTTCAGCGGCATGTTATACAAGTTTAGTGTAGTAACTTTAACGGAAAACTCATCCTATAGTATTGGAAACACCACTGATTGGACAGACCTTCCGAGGCCACGACCAGTGAGCAATATCACAGTGACTGATATTGTGTATGACATTAAACGAGCTATTCGTCCCAGGCTAAAGCTCTCAGCATCTTGGAATCGAGTGAACGAAAACGCAACAGTTCTTTCTAACTATGCCCTGGTCTGGACCCCGGATTATCAATGCACGTTGGATGGCGCTCATATCGGTACACGTATCAGAACTACAATAGTAGACGGGCGGAACGCAGAAAATGGATCCATCTATTTCACTGACAATATACTGAAGTGTAGTTTCTATTTGACGGTTTTTGCCTTGAATAAGTGCATCCCGAGTGAAGGGACATCAATAGCACATGAATACCCTGGATGCAGGAATACCACTGATTACCCAAAAGAGTTGTGCTTCCAATTTGATCCTCCAGAAGCGCCAGAACAGGACAAACAAGTTAGAAACCTAACCTACCAGATTGTCGCCATGAACAGTGACTACACGTTTAACTTTAACGCTACTTGGCTCCCACCTGTCTACCCTCACAAAGTCATCTATGAGTACTTGTTGTCATGGCAAAAATTTACCCAGTCGATGCCTTCTGGTATTCCCACTGGAAACCGTGGTTACACAGCAGAAACTTCGTTTACTCTGGGGCCATGGATGCCGAATGAGGTTTATGTCCTTAAGGTTCTTCCAGATTTTGAAGATTCTCTGCCAAGTGGCACTGAGAGAAATATTTCAATTTTTACGCCCGTGGTTGATCCTTCTCTTGTCGCTGTGCAAAAGTTAAAAATGGAACAATTCAAGTTATCACGAGAAACCGAGATGTTTCTTCTGAATGTTACTTGGGAGAAACCAGCGTTTAACTTCAGTAGCATTCTAAATTATGCTGTTTCATATCAAACATTTGAAGGACGAGTGGTATCGACCAACACGGACAAAACATATCTTCCAGTTTATGGACTGCTGTACGGTCAACCAATCGCATTAAATGTAACACCTCAATATAAACACGACTGGATACATGGAAAAACCGAAAGTGGCAGAGTGAACACTCCATTGCCCGGAAAGGAAAGGATCACAGTTAGGAATTTACAAACGAAATTCAGAAATGGAGACAACCAAACATTTTCGCTCAATGTTACCTGGGATCCTCCCTCTTTCCGGTGCGGTTATGTGCGGTATTACACCCTGTCTTACGAATTCTCTGGTTACCTACGACATCAGTTTTATTGCCCCAGTGAACCCGTGAGGAGAATCGGCTGCAAAGTCGCTGGCATAGAGAACACATTTTACCAGATATCAGGAATATTCCCACTGGAGCGTTTCAACCTTGTGGTTACTCCCGTTTACAACGATAAATATATTTATGGTAAAGAGAACAGAACTAATGATCATGCACCAGCACCACTTGAGTCACTGTTAAAAGTTGTTAGGTTGAAGCATGATGGGATATCACATAGCACCAACGGCACATTTCGCTTCACGGTCAGATGGCAAAAGCCACTCTTCTTACACAGCGTTGTCAAACACTACAAGTATAAGATCACCACGAAAGTCGAAAAAATCGAACAAGTCCAACGAAGAGCTATTGATCTATACACCATGTTTACCACAGAGTATACAAATGTTACTATAGATGGAATTCGCTTGGATGAGGAGATTTTTTTTCAGGTCACGCCTGTCTTTGCAGTTGAAATTGTGATGGGAATTGAATCCAGAATTCCAATTCTTAATCCCACAATAGCACACCAACTGCCTGGGGGATGGACTGCGGGAGAAATTTCTGGCCTTGTGTGTATTTTGCTCTTATTTGTAACGATTGCCTGCTGTTTGATAGTTTGGTGGCGAAAGCGGGAAAACAAAGGCCTTTTTTCAGGTCCAAACTCTCTTATGATCGATCATTGGGAGGTAGATGCGAATTCGGTGATTTTAGAGGCGGAGATTGACGAAGGCGCCTTTGGTAAAGTCTACAAAGGCTTCATGAAGAAACCAACCGGAAACGTCCAAAGACACCTGATCTTGCCATCCAAAAAACGCTCCATTTCTGTTGATGGAAGCGAATTTCTCACTGTGGCAGTCAAAATGATGCAGAATGCTTCAGATAGCGATCAGCGACGGGAGTTTCTTGAGGAGATGCAGATAATGAAAACCGTTGGATCTCACAAAAACATCGTTACacacgtgtatgaagaacgagtttacaaagcaaaacgaaacaggaaactcccattaaaatggatgtcaattgaagctatctttgatcaaacatttaccacacagagcgatgtctgggcctttggagtggtcttgtgggagattgtaacattaggcggaacaccctatccagctctagacaacagagaactactgaagctgttaagggaaggctatcgaatggagaagcccgacacttgctgtgatgaactttatgaaatgatgatcgagtgctggaaagaatctcctgagagtcgcccaagcttcactcaattacgagacagtctggaggcaataatgcaaaaggataacccctatttggatctacgtgctgtggatgagtcaagggcgtactacaatgtgccatcatttcacagcataggcgacgaattaagtgactttaaaattcaagttgataacaaagatagttgtgagctcgagaatgatgctaaaacaacggcgaaatcggatgttcaaggtaacacaaaatctagagtatga

Transcript

Ahemp_005046-T1

Protein

Uniprot

Uniprot term	Description
P35546	Proto-oncogene tyrosine-protein kinase receptor Ret OS=Mus musculus OX=10090 GN=Ret PE=1 SV=2
G3V9H8	Proto-oncogene tyrosine-protein kinase receptor Ret OS=Rattus norvegicus OX=10116 GN=Ret PE=1 SV=1
P07949	Proto-oncogene tyrosine-protein kinase receptor Ret OS=Homo sapiens OX=9606 GN=RET PE=1 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07714	PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001245	Domain	Serine-threonine/tyrosine-protein kinase, catalytic domain	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR003961	Domain	Fibronectin type III	Interproscan
IPR050122	Family	Receptor Tyrosine Kinase	Interproscan
IPR036116	Homologous_superfamily	Fibronectin type III superfamily	Interproscan
IPR000719	Domain	Protein kinase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24416	TYROSINE-PROTEIN KINASE RECEPTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0004714	Molecular Function	transmembrane receptor protein tyrosine kinase activity	Interproscan
GO:0005887	Cellular Component	plasma membrane	Interproscan
GO:0007169	Biological Process	cell surface receptor protein tyrosine kinase signaling pathway	Interproscan
GO:0007275	Biological Process	multicellular organism development	Interproscan
GO:0033674	Biological Process	positive regulation of kinase activity	Interproscan
GO:0043235	Cellular Component	receptor complex	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan