Detailed information of Ahemp_005282-T1 in Acropora hemprichii

Genomic Location: scaffold_13:44764...63341
NR annotation: XP_015754748.1, PREDICTED: DNA mismatch repair protein Msh3-like [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P20585DNA mismatch repair protein Msh3 OS=Homo sapiens OX=9606 GN=MSH3 PE=1 SV=4
P13705DNA mismatch repair protein Msh3 OS=Mus musculus OX=10090 GN=Msh3 PE=2 SV=3
Q2UT70DNA mismatch repair protein msh3 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=msh3 PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00488MutS_VMutS domain VDomainInterproscan
PF01624MutS_IMutS domain IDomainInterproscan
PF05192MutS_IIIMutS domain IIIDomainInterproscan
PF05190MutS_IVMutS family domain IVDomainInterproscan
PF05188MutS_IIMutS domain IIDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR016151Homologous_superfamilyDNA mismatch repair protein MutS, N-terminalInterproscan
IPR036678Homologous_superfamilyMutS, connector domain superfamilyInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR045076FamilyDNA mismatch repair MutS familyInterproscan
IPR000432DomainDNA mismatch repair protein MutS, C-terminalInterproscan
IPR007695DomainDNA mismatch repair protein MutS-like, N-terminalInterproscan
IPR036187Homologous_superfamilyDNA mismatch repair protein MutS, core domain superfamilyInterproscan
IPR017261FamilyDNA mismatch repair protein MutS/MSHInterproscan
IPR007696DomainDNA mismatch repair protein MutS, coreInterproscan
IPR007861DomainDNA mismatch repair protein MutS, clampInterproscan
IPR007860DomainDNA mismatch repair protein MutS, connector domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11361DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006298Biological Processmismatch repairInterproscan
GO:0030983Molecular Functionmismatched DNA bindingInterproscan
GO:0003690Molecular Functiondouble-stranded DNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006312Biological Processmitotic recombinationInterproscan
GO:0140664Molecular FunctionATP-dependent DNA damage sensor activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K08736MSH3; DNA mismatch repair protein MSH3-DNA repair and recombination proteinsko03400deepkoala

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