Gene detail

Detailed information of Ahemp_005848-T1 in Acropora hemprichii

Genomic Location: scaffold_14:4493242...4521523
NR annotation: XP_044174296.1, LOW QUALITY PROTEIN: kinesin-like protein unc-104 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Ahemp_005848-T1

ATGTCGTCTGTGAAAGTAGCTGTTCGAGTGAGGCCGTTTGCAAGCCGAGAAACAAACCGGCACTGCCATTGCATCATTGGTATGCATGGAGCTACAACCACTATCTTAAACCCACGAAATTTGAATGAAAAGCCAAAGAGTTTTACGTTTGATTATTCATATTGGTCTCACAATGAGGGTGACCCCCATTTTGCAACACAGAAGAAAGTTTATGCTGATATTGGTAAAGAGATGCTAACCCATGCATTTGAAGGTTACAACATCTGTATTTTTGCTTATGGCCAGACTGGGTCTGGAAAGTCATATACCATGATGGGAAAACAAGAGGCTGATCAAAAAGGAATTATCCCTCAGCTCTGTGAAGAACTTTTTGAGAGGATTAATGAAAGCAATACTGAAGAAATGACACTGTCTGCTGAGGTCAGTTATCTAGAGATCTACTGTGAAAGAGTGAGGGATTTACTGAGTCCAATTGCCAAGAACAACCTAAGAGTCAGGGAGCACCCAATGCTTGGTCCGTATGTAGAGGACTTGACTAAACTTGCTGTTACTTCATTTGCTGATATAAATGATCTGATTGATGAAGGAAATAAAGCCAGAACGGTAGCTGCTACCAACATGAATGAAACAAGCAGCAGGTCACATGCTATTTTCAGCATTGTATTCACCCAAAGAAGCCTTGATTCCCTGTCTGACCTTCCCTCAGCAAAGGTTAGCAAGTTGAGTTTGGTGGATCTTGCTGGAAGTGGCAACTCCAAGACAGCAATGATCGCTGCCATCAGTCCAGCAGATATCAACTTTGAGGAAACTTTGAGTACACTAAGATACGCTGATCGGGCGAAGCAGATTGTGTGTAAAGCAATCATCAATGAAGATCCTAATGCAAAGATCATCAGAGAATTAAAAGAGGAGGTTTCAAAGCTAAAGGAACTTCTTGTCATTGAAGGCTACAACCCTGAAGATCTTCAATCAGCATTAAAGCAAGGCAGCTCCACATACTTAACCCGGAGACAAAGCCAAGATTCTCATGATGGTACCCTGGACAAGCTTAAGACATCTGAAAAACTTATAGCTGAACTCAATGAAACATGGGAGGAGAAGCTGCGGAAAACAGAAGCCATTAAATTAGAGAGAGAGGCAATGCTGGCGGAGATGGGTGTGGCCATTGGTGTGGACGGTCACACTGTTGGACTATTTCAACCAAAAAGGAGACCTCATTTGGTGAATTTAAATGAAGATCCATTGATGTCTGAGTGCCTACTCTATTATGTTAAGGAGGGATTCACTAGGGTAGGTCAGGCTGGAGCTAAAAGCCATCAGGATATACAGCTGAGTGGAGAAAACATTTTGGACGAACATTGCGTCTTAGAGCATACTCCAGGCTTGGTGAAAATAATTCCTTGCAAAAATAGCCGTACTTTTGTAAATGGGAAACTGGTGACGGAATCAACCGTTTTGCGATCAGGAGCACGTATCATTTTGGGAAACAATCACGTATTCAGGTTTAATTTCCCTGATCAAGCCCGCGAAGAAAGAATCCGTCGATCACAAGGAAATCTGCTTTCGATTGAAGTTACAAACGGTAAAAGTGAGGCAAAAGCTGAAGATCCCGTGGACTGGTCATTCGCTGTACTGGAACTGTTGAGAGAACAGGGATGGGACGTCAAAGAAATGAATGACAGGGTACAAGAGTTAGAGGAGCAAATCAAGAAAGAAAAGGATCAAGCAGATTTGCTATTGCAACAGCAGAGACTGGCATATGAAATCAGGCTGCAAGAATTACAGCGACAGGTGGACGTGTCATCTGTCCCTTCCAGCGAATCAGTAGACAGTGACATTGACGTGGAAAGCTTTGAAAGTGAGAGCCCGTTGACCGAGCGTGAGCTCAATTTGGCAGAATTAGTTTTGGACAAGTGGAAGTGTTATCAGTGTACGTCACTGAGGGATGACTTGTTAAGTCATGCAGTTTTGTTAAAAGAAGCAAATGCAATTAGCGTGGAGCTGGGGAAGAAGGTGGAGTTTCAGTTCTCTCTGCTAACTGACACACTCTACACTCCTCTGCCTTCATTCCTCGCGGCTGATGTCAGGTATAAATGTCATTCTACTGTACTTGCCATTGAAGTAAAGGATATGAAGAATGGCGCTTCTCATTACTGGTCGCTCACCAAATTAAGGGATCGACTTGAAGATATGCGCCTCATGTACGACACTGCAGCTGAATGCAACAGTAATGTTTCCTTTGACTCAGCTGATCCTTTCTATGATTCTCTACCTTGGTTCAGACTTGTTGGAAGATCCTTTGTATACCTGAGTAACTTGCTGTATGGTGTTCCGCTAGAGCAAAAGGCGCCGATTGTAAGTGACTCGGGAGACATACAAGGTCATCTTGTCATCAACGTCGAGCAGTGTACAGACGAGCAAATGTGGGGCGTGGATCGAGATGGTCGGCCTAATGTGATGTGGCTGGAGTTTCCATCTGAAAACCGCGAGAAAACAAATATTCGATCTGATGACCGAGAAAGTAAACCTGGTGTTAAGGCGGCAGAGGAAGCTGCAGAAGCTGACACAGCGACCGAGCCTCCGTTTTCCAAGGGTACACTTCTTGTTGGGCAACCTTTCGTGATGAGCATCACGGTACTGCAGGCTCAAGCCATTCCAGTTCCATACACAGACGTCTTTTGTCAGATACGGTTTCTTTGCAGCGAAGAAGATGAGGGATTTTCCACCGAGCCAGTGGAAAATAACTTAGCGGATAAACCTTTGATGTTTGAATACTGTCAGAAGGTTGGTGTCATAGTAAACCGCGCTTTCATCGACTATATCAGTACCAGTCCCTTGCAAGTTGAAGTGTTTGGACACTATCAACGTCAGCCACAGTATCTCTCCAATGAAAAACTTCCAAGAGCCATTGTAAGGGAAGGAAAAATGGAACCAAAGTCTCATCGAGACCTTTTGCATTCAACTATATCTTTGTCATATTGTGGCAAACAGTGTAGATTTCTTGTCCGAACTACCACCGAGAAAGAACAAGACGCCTTTGATTGGCTTTACGCACTTGACCCCCTGTTGGTAGGAAGCATAAGGTCAAGGAAAGGAATTGTAAAAGAAGGTGGGAGGTGA

Transcript

Ahemp_005848-T1

Protein

Uniprot

Uniprot term	Description
Q12756	Kinesin-like protein KIF1A OS=Homo sapiens OX=9606 GN=KIF1A PE=1 SV=2
Q28WQ1	Kinesin-like protein unc-104 OS=Drosophila pseudoobscura pseudoobscura OX=46245 GN=unc-104 PE=3 SV=1
P33173	Kinesin-like protein KIF1A OS=Mus musculus OX=10090 GN=Kif1a PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF16183	Kinesin_assoc	Kinesin-associated	Family	Interproscan
PF00498	FHA	FHA domain	Family	Interproscan
PF00225	Kinesin	Kinesin motor domain	Domain	Interproscan
PF12423	KIF1B	Kinesin protein 1B	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR032405	Domain	Kinesin-associated	Interproscan
IPR001752	Domain	Kinesin motor domain	Interproscan
IPR036961	Homologous_superfamily	Kinesin motor domain superfamily	Interproscan
IPR008984	Homologous_superfamily	SMAD/FHA domain superfamily	Interproscan
IPR000253	Domain	Forkhead-associated (FHA) domain	Interproscan
IPR022140	Domain	Kinesin-like KIF1-type	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47117	STAR-RELATED LIPID TRANSFER PROTEIN 9	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003777	Molecular Function	microtubule motor activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0007018	Biological Process	microtubule-based movement	Interproscan
GO:0008017	Molecular Function	microtubule binding	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan