Gene detail

Detailed information of Ahemp_006040-T1 in Acropora hemprichii

Genomic Location: scaffold_15:2491396...2498118
NR annotation: XP_015751362.1, PREDICTED: uncharacterized protein LOC107331304 [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
P27590	Uromodulin OS=Rattus norvegicus OX=10116 GN=Umod PE=2 SV=1
B3EWY9	Mucin-like protein (Fragment) OS=Acropora millepora OX=45264 PE=1 SV=1
Q91X17	Uromodulin OS=Mus musculus OX=10090 GN=Umod PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12661	hEGF	Human growth factor-like EGF	Domain	Interproscan
PF00008	EGF	EGF-like domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000742	Domain	EGF-like domain	Interproscan
IPR013032	Conserved_site	EGF-like, conserved site	Interproscan
IPR001881	Domain	EGF-like calcium-binding domain	Interproscan
IPR050906	Family	Notch signaling pathway	Interproscan
IPR000152	PTM	EGF-type aspartate/asparagine hydroxylation site	Interproscan
IPR009030	Homologous_superfamily	Growth factor receptor cysteine-rich domain superfamily	Interproscan
IPR018097	Conserved_site	EGF-like calcium-binding, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24044	NOTCH LIGAND FAMILY MEMBER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005509	Molecular Function	calcium ion binding	Interproscan
GO:0005112	Molecular Function	Notch binding	Interproscan