Gene detail

Detailed information of Ahemp_006067-T1 in Acropora hemprichii

Genomic Location: scaffold_15:2949470...2964638
NR annotation: XP_015747880.1, PREDICTED: uncharacterized protein LOC107327650 isoform X2 [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

Ahemp_006067-T1

ATGAGGCCTTCCAAAAAAAAGTCACAGAAGGTACCAAAAAAGAAGTCAGCTGAGCCCGGACCTAATGATGATGATTCTAAGGATGTTGACAGGGCCGATGAAAAGGTTGCAGTGGAATATGAGTTGACTGATGTGGACAAATTGTACCTTGCATTAGTAGAAACTGGCCAAGACTCTGCATTTAATGCCTTATACTACTTTCTTAACATCACCAGTATTAAAGCTTTGAAGGAGTTCAATCCCACTGGAAACAATAATTATGGGGACTTTCTTCTGCCCAATGATATTAATACCATGAAATACAACATCTGTGACAAGCATTTCGATTTCCAGAAACTTACACTGAAATCTAAGCGCAGCAATATTATTGAGACTTATTCAAAGAAAGGAATACCAGTAATCAAGAGAGAAGATTTGAAGGAGGTGAAGCCCATTATATTTGGTTCTGAATATTATGGTGTTGTGTGTCAAGCCCAGTGGACCAGACCTGATAGAATAAAGGAAACAGTTTGCCTTCGATATGAAAATGAGTATTTCTTAGGTGACTTTTTACTTGAAGCAGAAATGTCATCTTTATTACGTCACCCCAACATCCTTGTTCTTCATGGTGTGGTCATTTCAAGTTCGTTTTCTCCATCAGTGGCTCTGGTTTTGGAGTTTGCAGAGTACGGTAACCTCCATGAATCCAGTGTGCACCGTTCAGTGGAGCGACTTTGTAGATTCACAATCCAAACTGCCTCTGCACTGGAGCATCTGGAGAAGAAGAATGTCATTCATCCATCAGTCAATTCATTCACTTGTTTGGTTGTTTCAAAAGATCAGgtgaagctttctggccttggagtttgccgcttcaaaagtgaactggatggAAAGCTTTCACAAAATGATGAGCTCAAGAATGTGGTTTATCAGTTTGCCAAGCTTTTTTCAACATACTTTGCTCGCTACGAAGAGTTGACTCCAGATACTATCATTGCGAAAAACATCAATAAACTCAAGTTTCATGGCTCCTATGGACCCCTTTGTCCTCCTCATTTTTGTGAAGTATTCGACCGCTGTTTGTCAAAGAATCCAGATGCAAGACCTTCCTTTAAAGACATAAGGCAATCACTTGTTGCGCAGAATTATGCATTGAAAGTGAAAGTTATAAGCAGTTTTAGCGCTGAGTCTGCCGAGTTCTTAAATTGTAGGGCTGGTGAATTGATCACGCTTATAGCCAAGGATTGTCACAGGAAAGACAAAACTGCTTGGCTGGGGGAAACGGAGGAACGAAAAATTGGATTTTTCAAGAGCGAAAATGTTCAAGAACAGTTTAATTATGAGAGTTTGGATGGGTCATTTGTACCAGCGGAAATTAGATGCCGGGGCCCAAGGTCCCACCGTGCTTTTCAGAAGGCCATGCAATCTGGCAAAGTGAAAGTTTATCGCGGGCGCATTATGCTGCTTGGACAAGACCGTGCAGGCAAAACGAGCCTGAAGAAATCTCTTCTCGGTTTGCCCTTTGACCAAAATCAAGAGAGTACTATTGGAGTTGAAGTAGACCCGACGAAATGTGAAGTTGACGTGGATCAAGTCAAGAATTGGATGCCAAATGAACGAAAGAAGCGCGAGATGTCCGAGTTTGAAGAAGAAATCGCAAGGTTCATCGCCAGGGATTTGACTGAACCAAAAGCAGACCACAACGATTCTACCGCTACTAATCTTGATGTAGAGGAAGTGAAGACAACTGATCTGCAAGAGGAAAAGGAAGACCAAGACGAACCAGAGTTGTTGTCGCATGTAGATAAATCAGCGACCGATACGCAAGAGAAAAGTGATAATTTAGAGGACGGGGCGAAAGCAATCTATGAAGAAAAGCCAGTTGACAACGACCAAGTCAACAACGAGCTTCAGTTAAATATCAATTCAACGACTTTACCAAACGATGTCACTCACCTGGTTGTGCGTTACTTACAAAGCCTCCGACTGGAAGATGACATCAAAGCCAAAGAAATAATCTTCACTTTGTGGGATTTTGCCGGCCAACATCTTTATTATGCTTCGCATTCCGTGTTTCTGTCCGGGCGAGCAGTTTACGTCTTGGTGTATAATCTCAGTAAGAACTTACTGGCAACGGCAGAGCCTTGTGTCAGACAAGGCATCCATGACATCGTGCTGGATAATCCGAACAATGAAACCAATTTGGATAACTTGTTATCATGGCTCGTTTCAGTCCACAACATCCGATCTGATGCCAACGAAAGCCATGAAGATGAAGAAACGAAGCAGTTCTATCTACGGCCACCAGTGATTATCGTTGGAACACATTCAGATCAGCCTTTTGAAGAAGTGGAGACCGCGGAAAGGCACATCAAAAAGGGTATTTCAAAGAAGGCGTATGTGAAACATATCATGAAGCCATTTTTCGCTGTCGATAACAGGACGGAAAACGAAGTGGTGCATAGAATCATGGAAGTTTTGAAAGGTGAACCCTACATGGGTGAAGAACTACCACTGAGGTGGTTCAATTTTGAAAAAGCTGTTGATGCTCTTGTGGAAAAGCAGACATATTTCATGGATCTCGACCGACTTATCTCTATCATTCGACAAGTTTGCCACATTGATGACGAGGAAGAAATGACAGCTATGCTGAATTTCTATCATGATCTCGGCGTGATTGTAAAGCATGGTGGTACTGTGGTGCTGCAGGCCCGGTGGCTGATCGATCTGTTTAGGCAACTTATCACAGTGCGGCCTTTTGACGAGGCTGATCCTTTGTACTTGGACTGTTGGGAGGAACTGGAAGAAAACGGAATTCTGAGGATAGCTCTTGTCGACCATGTGTTTTCTAAGTTCATCCAGAAAGGCCTTTTCAAGCAAGATATTCTGGCTATGATGGAGCTATATGGATTGATTGCCAAATTTTCAATCGCCACAGGTGAAAATGGAGCAGAACAAAAATATTTTGTTCCGACGCAGCTGAGATCATCCCCATCTGGTCTGTGCAAGATCGAGCCGTCTGAATGTGATCCGTGCCCACTGATTCTGCATTTTCTGGATGGTTTTGTACCGCATGGGCTCTTCCCCCAGCTTTTGTCGAAGTTCATTCATTGGTGTTCCGAAAATGGGCTCAAAGAAACGCCACAGCTTTTCAACAATGGGGCCAGGCTTTTCATCGGAAAACAGATCGCCTTTGATCTTATCCTGATTTGCGGAAAGAGGTTAATCAAAGTCATTTTAAAAAGAAGGAATCTGACTTCGTCCAAGTCCTCATTGAAGATTGCCACAAACATAATGGCTGTCGAAGTTCGCAACTTTATCGAGAAAACCTTAGTTGGCTTTTCACGTGAGCTTTGTTGGTTAAGCAATCTTCGGTACGAACTGAGTGTGGTGTGCACCTATTGCCTGGAAAGCAAGGGTTCCCTTGACAGTTCGATGAGTTGTTGCCAAGACGATTGCTTGCATCTTCTTCGGGTTTCTCCTGGTAAAGAGCTGATATGTCGGAATAATTTCTCCGATGAAGCGGTCAAGGTTCCTGGATGGGAGATGTGGTTCGAAGTCCCTCCTTCCCAGGAACCAAAAATGGATAATTCAGAGCCAGTGGGTGTAGATGAAGGTGCCCCGTTAAAGACTAGTGTCCCTTCACGCGATGATATTCATCTCATTGCGATTGAGCTTGATTCTTCGTGGAAGATGGTTGGACGACTGCTCGACGTCCCGGATGCTGTGATTGATCAGATTGAAGAAGACGAGTCTGAAGGCTATGATAGATGCTACAGTGTTCTAAGACGTTGGAAACAGATGTACGGATCTGATGCAACATATCAACGCTTGGCACGTGCATTGCGGAATCCCCATGTTGGGAAATCACATTTGGCAGACAAATTCTGCGGTCTTCAATTTTGTAAGGATAAAGCAGTGGCTAAGGATTGTTAA

Transcript

Ahemp_006067-T1

Protein

Uniprot

Uniprot term	Description
Q55E58	Probable serine/threonine-protein kinase pats1 OS=Dictyostelium discoideum OX=44689 GN=pats1 PE=3 SV=1
Q5S007	Leucine-rich repeat serine/threonine-protein kinase 2 OS=Homo sapiens OX=9606 GN=LRRK2 PE=1 SV=2
Q5S006	Leucine-rich repeat serine/threonine-protein kinase 2 OS=Mus musculus OX=10090 GN=Lrrk2 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00531	Death	Death domain	Domain	Interproscan
PF07653	SH3_2	Variant SH3 domain	Domain	Interproscan
PF07714	PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	Domain	Interproscan
PF08477	Roc	Ras of Complex, Roc, domain of DAPkinase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000719	Domain	Protein kinase domain	Interproscan
IPR011029	Homologous_superfamily	Death-like domain superfamily	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR000488	Domain	Death domain	Interproscan
IPR001452	Domain	SH3 domain	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR036028	Homologous_superfamily	SH3-like domain superfamily	Interproscan
IPR036388	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan
IPR001245	Domain	Serine-threonine/tyrosine-protein kinase, catalytic domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47508	SAM DOMAIN-CONTAINING PROTEIN-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0007165	Biological Process	signal transduction	Interproscan