Gene detail

Detailed information of Ahemp_006228-T1 in Acropora hemprichii

Genomic Location: scaffold_16:353809...357458
NR annotation: XP_029205121.2, transmembrane protein 43-like [Acropora millepora]
Species abbreviation AHEMP · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9DBS1	Transmembrane protein 43 OS=Mus musculus OX=10090 GN=Tmem43 PE=1 SV=1
Q5R9S8	Transmembrane protein 43 OS=Pongo abelii OX=9601 GN=TMEM43 PE=2 SV=1
Q5XIP9	Transmembrane protein 43 OS=Rattus norvegicus OX=10116 GN=Tmem43 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005354 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07787 all species →	TMEM43	Transmembrane protein 43	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR012430 all species →	Family	Transmembrane protein 43 family	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13416 all species →	UNCHARACTERIZED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005635 all species →	Cellular Component	nuclear envelope	Interproscan
GO:0005639 all species →	Cellular Component	obsolete integral component of nuclear inner membrane	Interproscan
GO:0006629 all species →	Biological Process	lipid metabolic process	Interproscan
GO:0071763 all species →	Biological Process	nuclear membrane organization	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K27488	TMEM43; transmembrane protein 43	-	Cytoskeleton in muscle cells	ko04820	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.