Gene detail

Detailed information of Ahemp_006746-T1 in Acropora hemprichii

Genomic Location: scaffold_17:3437668...3459703
NR annotation: XP_044178189.1, arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Ahemp_006746-T1

ATGCCTACTCCACGCAAGATCAAGAAATCTCTTATTGATATGTATTCTGACGTTCTGGATCTACTGTCTGAATATGATGTCAGTTACAACACCACTGACCATCTACCAAGGGTTGTTGTAGTTGGGGATCAAAGTGCGGGTAAAACAAGTGTTCTGGAGATGATTGCACAAGCTAGAATTTTCCCAAGGGGTTCTGGACAGATGATGACCAGGGCACCTGTTATGGTGACCTTGAGTGAAGGCCCCAATCATATGGCACAATTCAAGGGCAGCACTCACCAATATGACCTTACTCAAGAAAATGAGCTAAAGGCCCTTAGGCAGGAAGTTGAAATTCGCATGAGGAACAGTGTCAAAAGTGGACAAACTGTTAGCCGTGAGGTGATCTCCCTTAGTGTTAAAGGACCAGGTCTCCATCGTATGGTATTGGTTGACCTTCCAGGAATCATTGGGACCATCACAGCTGGAATGGCAGAGAACACGAGAGATGACATTGTAGAGATGAGCAGAAATTATATGAAGAATCCAAATGCCATCATCTTGTGTATTCAAGGAACACCGGCTGTTTTAGAAAGTGTTTTAGGAAATTCGTCCGCCCTTCCGTTGGAAGGATTGTCAGCTCAGTTTACTGTGGATAAGAAAGAAATGGAGGAAAGGCATTCACTGGTTCAGAAAATGGAGGAGAGTGGTGGCTTAAGAAGAAGACAACTTGATGATCCAAGGTACTGTCTAATGCATAATACATGCTGCATTGTTGCTCACACTGCTATTAAGTTGTCTTTATCTCTTGCATGTTCATACTTTCTTAATATTCCTGTTATATGCTTGTCACAGTGGTTTGGTTATGGAAGGATACTTGTTCAAAAGAAGCAGCAATGCGTTCAGGAGTTGGCAGAGGATGACCTTACAGTGCTTGCAGAGGATCTGAGACTTTGTAAAGTGAGACCCACAGAGGAACCAATAGAGAGGAGATTTGTCTTTGAAGTTGTTTCACCAACAAAGTCATGGATTCTTCAAGCTGACAATGATTATCTGAAAACTGAATGGATGGAGGCCATGCAGGCCAGCATCAACAAAGCTTTTGATTGTCCGACATCTGGGGAAATAGAGAAAACTGAGACTGATTCTCTGAGCTCTGGCACAAAGAGCAAAAGTGTGGAGTCCCTGGATAAACTTTCTGAACCCAAAAGTGTTTTGGAACAAATTCGATCTGTTCTTGGAAATGACAAATGTGCTGATTGTGGTAAGGTTGAACCATCATGGGCAAGTACTAATTGGGGTGTGGTGCTTTGTATAGAGTGCTCTGGAATTCATAGGAGTCTTGGAGTTCATGTGTCCAAGGTGCGATCTTTGACCCTTGACGCCTGGGAACCGGAGCAGATCAAGGTCGGAAGAACTGAAAGAGAAGCATGGATCAAGGCGAAATACTTGCATCGCAAATTTGCTTCTCTAGAAGTCTTTCTGTCCAACTGTCAAAGACTTGACAAGGGAATTATAAGAAATCTTGCAAGAATGAAGGTTCATCACGAAGAGAAGGCTGTTCGTGCACCTGAGAGAAGTAACTCCAAGAAGAATAGAATATTTAAACGGAAACATGTTCTAAAAGTAAGTAAGTCAAAAATGGACAATAGAAAGAGTGCACCACCAAAGGTGTTATTGACAGATGTAACTAGTGATGATCATGAAAGTCTGGAAAAGATTGCGGCTAGTTATCTTGAGCACAGCTCCAGTGATAAGGCAGTTAGTAGCGATTCGCATGATGAAGGATCTTCCGATGGAATTAGGAGACCGCGAGCTGCTTCCACCAGCGGCATCAGAGATCGAGTGAATTCCATTGACTCGAGTGATGATGGACATTTGGCTGAAGACACTGCCGAGGTGGAGCTAAATGAAGAAGAGGGTTTAAGGCAAGACAAAGGGAAAGCCATTGCTGTACTAAAACGGATACATCCCAGCCGGTTATTGTTCAAAGCTGCAGAATGGAAGAGTCTCCCTCTTATGGCAGCAGCACTCGCTGAAGGTGCTAAAGTCAATTGGGTCAACGAGGATGTTGAGAGTAAAACGGCGCTTCATCAGTCCATTCTTGGGGGTTCACTATCAGCATGTGAATTTCTTTTACAAAATGGTGCCAAGATAAATCAAAAGGACAAGAGAGGGAGAGGAGCTTTACATCACGCTGCCCTTTTGGGACAAACGGGTCCCACGCTGTTGTTTTTAAAACGAGGTGGCAATCAGCATGACGTCGATGAGAATGGAGAGGATCCTCTGACTATAGCTGTCAAACAGATGCATGCGGACATAGTAACACTGTTACGACTCGCCAGACTCAATGACGAGATGAGGGAAAGTGACGAGATAAGCCAAGGTGACAACACGTTCTCCGATGTCTTCAGAGACTTTTCCAATATGGCTTCTAAAGAACCTGACAGACTACAAAGAAAGTTTGATTCAAAGGACCCAAACAGGCAAACGCCCGTGTGA

Transcript

Ahemp_006746-T1

Protein

Uniprot

Uniprot term	Description
Q5ZK62	Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 OS=Gallus gallus OX=9031 GN=ACAP2 PE=2 SV=1
Q15057	Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 OS=Homo sapiens OX=9606 GN=ACAP2 PE=1 SV=3
Q6IVG4	Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 OS=Oryctolagus cuniculus OX=9986 GN=ACAP2 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01412	ArfGap	Putative GTPase activating protein for Arf	Domain	Interproscan
PF00023	Ank	Ankyrin repeat	Repeat	Interproscan
PF00350	Dynamin_N	Dynamin family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR030381	Domain	Dynamin-type guanine nucleotide-binding (G) domain	Interproscan
IPR001849	Domain	Pleckstrin homology domain	Interproscan
IPR001164	Domain	Arf GTPase activating protein	Interproscan
IPR045258	Family	ArfGAP ACAP1/2/3-like	Interproscan
IPR036770	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan
IPR037278	Homologous_superfamily	ARFGAP/RecO-like zinc finger	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR002110	Repeat	Ankyrin repeat	Interproscan
IPR001401	Domain	Dynamin, GTPase domain	Interproscan
IPR038508	Homologous_superfamily	ArfGAP domain superfamily	Interproscan
IPR045063	Domain	Dynamin, N-terminal	Interproscan
IPR011993	Homologous_superfamily	PH-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23180	CENTAURIN/ARF	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005525	Molecular Function	GTP binding	Interproscan
GO:0005096	Molecular Function	GTPase activator activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0003924	Molecular Function	GTPase activity	Interproscan