Gene detail

Detailed information of Ahemp_006758-T1 in Acropora hemprichii

Genomic Location: scaffold_17:3638684...3648285
NR annotation: XP_029201060.2, ATPase family AAA domain-containing protein 3-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Ahemp_006758-T1

TTGAGGCTTATGGAAAAGTCGTCCCCACGTGTGGGTAACTTACATCATATATTCGAATTCCGTGACTATAGCAAAACATCGATCTTTTCTATTGAGATTAAGCTCTGATGTCTTGGTTATTCGGTGTCAACAAGCCTCCTCCGCCAGGAGAGGGACCTCCATTAATCCCGGAGCCGCCAGGGGGTGGGGATGGTGGCGGTGATGGCGGAGGCAAAGGTGAAACATCAGAAGGCAAACCTGCACCGGTATGGAGAAGTTTTGATCCCTCAGGGCTGGAAAGAGCTGCCAAGGCAGCAAGGGAGCTTGAGAAATCAGATCATTCAAAGGAAGCCTTGGAGATGGCACGACTACAGGAAACATCAAAACAATTGGAGCACCAGCGCAAGATTAAGGAGTTTGAGGCAAATATCGAAGCAATGCAATTGGACAAAACTCGCGTTGAACAAGAAGAGAAGAGAAAAACCTTGGCAACAGAAACACAGCAGCATCAACAGCGTGCTCAATATCAGGATCAACTGGCAAGAAAGCGTTATGATGACCAACTTGTTCAGCAGCGTCGTATGAATGAAGAGAGCCTGGCTAAACAAGAGGAATCAGTCAAGAAGCAAGAAGCCATGAAAAGAGGCACAATTGAATATGAAGCTCATTTAAAACATGAAAATGAGATGAAAAGACTTGAAGCTGAACTACGTGGAAAAGCAAAGATAGAGCGTGAAAATAGGGACATTAAGCTAGAGAAGATCAGGGTGAAAGCAGCTGAGCAACGGGAAACTGTGTTGCAGTCAATTAAGACTGCAGGAAGCATTCTTGGCGCAGGATTTGATGCTTTCATCTCAGATTGGGATAAAATTTCCGCCACTGCTGCTGGATTGACCCTCCTCGCCCTTGGTATTTACACAGCTAAATATGGAACCGGAGTTGGTGCCAGATTTATAGAAGCGCGTTTAGGAAAACCAAGTCTTGTGCGGGACACATCACGGCTCAATGTCTTTGGAGCAGCGAGACATCCTATTCAGACTTTTAGGCGTCTTTTTGTCAATTATGAAGACTCTTTGCAGGGGATCATTTTAAAGCCTTCACTTGAAACGCGACTCCAAGAAGTAAGCAAAGCCACTGCTAACACCAAGAAGAATAAAGGATTTTACAGAAATTTGTTATTTTACGGGCCACCGGGGACCGGGAAAACCATGTTTGCAAAGAGCCTTGCAAAGCATTCTGGAATGGACTATGGCATCATGACAGGAGGAGATATCGTGCCAATGGGGAAGGAAGGCGTCTCTGCAATGCACAAAGTCTTTGATTGGGCGCAGACATCAAGAAGAGGGTGAGACGTGTGCAATTTGAGCGTCTCAATAGGAAGATTTAGGAGTTTGAGATGACGACAGCAATAGCAACGGCAACGTCACAGATCAATGAGATGATTAGTTAAAAGAGAAAAAATAATCGTGCTGCACGTGCGGCACGCATTCAAGTGTATTGCTTTGACGTAGTCTGCCATACGGCGACGAAATTTGGGGCTCTGTCGACAACGCGAGCCCGCAGCAGTAAATCTTTCATTTCTCTTCATCTACATGAAAAAACTTTGTGCCAATCAAGGGAAAGGACATTTTTTACAACGTGACCAACATAGAATATGAATTTCTAGTTTCTAAAGAAACTGTGGTGCTGCGTCGGTGGGAGAGATCAAAACAAAAATTTGGTTTTATCAAACGAGTTGATAAAGGTTGAATTACCACCGTGAAAGATTTAGAAAGCTGACGTTTCGAGCGTTAGCCGCTCGTCAGAGCGAATATAGCAACATATAGAATAATCGCGACACACTTGTTGTTTGGAAGGAAGAAAGAAAGGTCTAGTTTGTCAACTTTATAAAGAAATGATGGTGCTTGTAATCTTACGGTGGTATTCTCACGGTTGATATACCAAGTTTTTGTTTTGTAAGTGCAGTCTGTCAAAAACATCGTCACTTCGAAGAGCTCATTTATTTGCTGTTTTTCCTCTCCACAGACTTCTACTTTTCGTTGATGAAGCAGACGCTTTTTTGCGAAAACGAAATCAGGAAAAAATGAGTGAAGATCTTCGAAGTACTCTTAACGCTTTTCTGTACAGAACTGGAGAATCATCTCGCAAGT

Protein

Uniprot

Uniprot term	Description
Q925I1	ATPase family AAA domain-containing protein 3A OS=Mus musculus OX=10090 GN=Atad3a PE=1 SV=1
Q3KRE0	ATPase family AAA domain-containing protein 3A OS=Rattus norvegicus OX=10116 GN=Atad3a PE=1 SV=1
Q5T9A4	ATPase family AAA domain-containing protein 3B OS=Homo sapiens OX=9606 GN=ATAD3B PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12037	ATAD3_N	ATPase family AAA domain-containing protein 3, N-terminal	Domain	Interproscan
PF00004	AAA	ATPase family associated with various cellular activities (AAA)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR039188	Family	ATPase family AAA domain-containing protein 3	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR021911	Domain	ATPase family AAA domain-containing protein 3, N-terminal	Interproscan
IPR003959	Domain	ATPase, AAA-type, core	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23075	PUTATIVE ATP-ASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005739	Cellular Component	mitochondrion	Interproscan
GO:0007005	Biological Process	mitochondrion organization	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K17681	ATAD3A_B; ATPase family AAA domain-containing protein 3A/B	-	Mitochondrial biogenesis	ko03029	deepkoala