Gene detail

Detailed information of Ahemp_007153-T1 in Acropora hemprichii

Genomic Location: scaffold_19:1018491...1028165
NR annotation: XP_029205270.2, DNA repair protein RAD50-like [Acropora millepora]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
A0A1L8GXM0	DNA repair protein RAD50.L OS=Xenopus laevis OX=8355 GN=rad50.L PE=1 SV=1
Q92878	DNA repair protein RAD50 OS=Homo sapiens OX=9606 GN=RAD50 PE=1 SV=1
P70388	DNA repair protein RAD50 OS=Mus musculus OX=10090 GN=Rad50 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13558	SbcC_Walker_B	SbcC/RAD50-like, Walker B motif	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR18867	RAD50	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000722	Biological Process	telomere maintenance via recombination	Interproscan
GO:0000794	Cellular Component	condensed nuclear chromosome	Interproscan
GO:0003691	Molecular Function	double-stranded telomeric DNA binding	Interproscan
GO:0006302	Biological Process	double-strand break repair	Interproscan
GO:0007004	Biological Process	telomere maintenance via telomerase	Interproscan
GO:0030870	Cellular Component	Mre11 complex	Interproscan
GO:0032508	Biological Process	DNA duplex unwinding	Interproscan
GO:0043047	Molecular Function	single-stranded telomeric DNA binding	Interproscan
GO:0051880	Molecular Function	G-quadruplex DNA binding	Interproscan
GO:0070192	Biological Process	chromosome organization involved in meiotic cell cycle	Interproscan
GO:0090305	Biological Process	obsolete nucleic acid phosphodiester bond hydrolysis	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K10866	RAD50; DNA repair protein RAD50	EC:3.6.-.-	DNA repair and recombination proteins	ko03400	deepkoala