Gene detail

Detailed information of Ahemp_007304-T1 in Acropora hemprichii

Genomic Location: scaffold_19:3532790...3553087
NR annotation: XP_044165791.1, DENN domain-containing protein 3-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Ahemp_007304-T1

GGTGAACCATTTTATCCCAAGTATGGTGTAGTGAGTAGCCCGGTCAAAAGGGGAGCAAAAGGTAGGCGTGGATCACTAATACATGTACACGGTGGACCCAAGCCAGCAGACTTGCCGTTATCACAAGAGGTCATCAGCAACCTGCCTGCACTTTGCTTTCCTGATGGTGCGTTTGTTTCTAAGAAAAGAAAGCCTGTTTCCTGTCATTCGATGGTTTTTACAGATATTGAGGGCAATCACACCTATTGTATGTCGATGACGTTTTTCAAAGGGTTTCTTCTCAAGGAGTCAGAAGACGATCGCCCCCTTGGCAAATATGAATTGTTCTTTATGGATGAGGATGTAGATGAAAGAACTATGCAGGATTCTTCCTACGCGGTTTGCTATGTTCCAACTTGCTGTTGTCTGATTTCCAAAAAGCCTTACTTTAATCTGATGAAGGACTGCCTGTCCTGCTTATTGCCGCAAGTGTTAAGAAGCGATGCACGCAGCTTCAGATTAGCTCTAATGCGGTTTGTATCACAGCTGGCCATGGTACCAATCCCACCTGCAGGCTCACTTGGAATAGAGTTCGAGCTCTGTGGCGTCAGGCATTTAGTCCGTCCTGCTGAAAACCCGGAAACCAGATTGATAGACATGGAGCTTCATTATCCGTTTCTTTACTTCTCTTTGGATGACATTCTGTTGTTGATCAGCTGTATATTGACACAACAGAGAATTGTTTTTCTTTCCTCGTCTTATTCCCTTCTTACTCCTATCATCGAGAGCTTTTTTACGTTTATCCAACCATTTTCCTGGAGTTTCACTTATGTTCCGATCCTTCCAAGCAACCTTCTTGATTTAGTGGATGCCCCAGGTGTGTTTATCATGGGTTGTCATGCGCAACACAAGCATCAGATTCATAGGTTTGTTACCGAGGTGGACGAGGTCTCCAGTATAGTAATCGCAGACATTGACGAAGGACAAGTTATGATTCATCGAGATGCAAAAATTCCGCGGCTACCCACTTATGCCACAGACATGTTCAAATTCAGAATGAAGAACGCAGAAATTGATTTTGAGCGAGTCCTTGTTGAAAGACAAACATTTTTCAATGTAGAAGAACTTCAACAGGAACGAGTAAAATTTGTCAGAAAGTTTCAACAGCTGGTTTTAGCCTCTGCACAGGAAATGATACTCCGAATGTTTAGCAACATAAAAGACGTCGTTGTCCAGCGTGAAGAAGATCTTTTTTTTGACATGGAGAACTTCATCGAGTCAAAGCCGTTCGACGACAAAGAGTTTTACAAAGAGGTCTGCCAGAGCCACTCCTTCAGCGCGTTCCTTCGTGACCTGATACGTGACCTGGATGTCATGGCTCAAAAAGTAGGAGTAGTGCCCAAGTTGCCATCTACGAGGAAAAGAAGTTCTACAACTGTTTCTGTGCACGTACCGGTCATTGCAGACCAGTTTTTTCAGAATCCACAGGCAGATTTAAGCATTTATGTTCTCCCACCACTTGGCCAAGAAGGGATTTACTCAGGGCGTTTCTATGGAGTTTACTCGAAATCTCTGGATGAAAAAATCTCGGATCTTATGGCCAAGTCTTCGAGTTTGGTAGCCAACTATTTGTATTTGCGTGGAATGCTGAGAGCTTCTTGTGGTGAGAATCTAGAGGCAATAGATGATTTCTTTTTGGTATCTTCGAGAAATGTCCAGCTCTTTCCAAAGAAGATTGTGCAAGAGATTTTGTGTAAACTGAAAGACGCAGAATTAGAGAAGTTAAGAACGCGGCAGTATTGGAGGAAAGCGGAGACTTTAAGAATGCAGGCTGAGGAAAAGCAAGATTTCAGACGAGATAGAAAAGAGGTCCTTACGTCAGCTATACCGTCCGCCCCTTTGACTCTTTCAGAGTTTGTGAAACATGTCAGCAGGCTACAAATTGCCGACAGTCGCGATGCAGGAAAAAGATTGTTTCATGCTCTAACATTCAGTTCCAAAGGAGAAGCTGTTGAGCCTGAAGCATTCGCTGCATTTTATGAAGCCTACACTATGGCTACCAGTGAGGCCACAAGCTTCTCATTGCGTAACATTCGCTTAAAAGATGATGAGGACATTTTGAAGATCTCAAAGCTCATCAGAACAGACCGTGGAATGGGATTCCTGGTTTTGACTAAATATAGGTAATATTCCAGACCTGAGATAATAGCCATC

Protein

Uniprot

Uniprot term	Description
A2RT67	DENN domain-containing protein 3 OS=Mus musculus OX=10090 GN=Dennd3 PE=1 SV=2
A2RUS2	DENN domain-containing protein 3 OS=Homo sapiens OX=9606 GN=DENND3 PE=1 SV=2
Q6NTN5	Myotubularin-related protein 13 OS=Xenopus laevis OX=8355 GN=sbf2 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02141	DENN	DENN (AEX-3) domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR043153	Homologous_superfamily	DENN domain, C-terminal lobe	Interproscan
IPR001194	Domain	cDENN domain	Interproscan
IPR051696	Family	DENN Domain-Containing GEFs	Interproscan
IPR037516	Domain	Tripartite DENN domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12296	DENN DOMAIN-CONTAINING PROTEIN 4	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0031410	Cellular Component	cytoplasmic vesicle	Interproscan
GO:0032483	Biological Process	regulation of Rab protein signal transduction	Interproscan