Detailed information of Ahemp_007748-T1 in Acropora hemprichii

Genomic Location: scaffold_21:2226907...2258319
NR annotation: XP_029198424.2, integrin alpha-6-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P26007Integrin alpha-6 OS=Gallus gallus OX=9031 GN=ITGA6 PE=2 SV=1
Q62470Integrin alpha-3 OS=Mus musculus OX=10090 GN=Itga3 PE=1 SV=1
P23229Integrin alpha-6 OS=Homo sapiens OX=9606 GN=ITGA6 PE=1 SV=5

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF20806Integrin_A_Ig_3Integrin alpha Ig-like domain 3DomainInterproscan
PF20805Integrin_A_Ig_2Integrin alpha Ig-like domain 2DomainInterproscan
PF13271DUF4062Domain of unknown function (DUF4062)FamilyInterproscan
PF01839FG-GAPFG-GAP repeatRepeatInterproscan
PF08441Integrin_A_Ig_1Integrin alpha Ig-like domain 1DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR048286DomainIntegrin alpha, third immunoglobulin-like domainInterproscan
IPR048285DomainIntegrin alpha, second immunoglobulin-like domainInterproscan
IPR028994Homologous_superfamilyIntegrin alpha, N-terminalInterproscan
IPR013519RepeatIntegrin alpha beta-propellorInterproscan
IPR000413FamilyIntegrin alpha chainInterproscan
IPR032695Homologous_superfamilyIntegrin domain superfamilyInterproscan
IPR025139DomainDomain of unknown function DUF4062Interproscan
IPR018184Conserved_siteIntegrin alpha chain, C-terminal cytoplasmic region, conserved siteInterproscan
IPR013517RepeatFG-GAP repeatInterproscan
IPR013649DomainIntegrin alpha, first immunoglubulin-like domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23220INTEGRIN ALPHAInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0007155Biological Processcell adhesionInterproscan
GO:0008305Cellular Componentintegrin complexInterproscan
GO:0005178Molecular Functionintegrin bindingInterproscan
GO:0007160Biological Processcell-matrix adhesionInterproscan
GO:0007229Biological Processintegrin-mediated signaling pathwayInterproscan
GO:0009897Cellular Componentexternal side of plasma membraneInterproscan
GO:0033627Biological Processcell adhesion mediated by integrinInterproscan
GO:0098609Biological Processcell-cell adhesionInterproscan

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