Gene detail

Detailed information of Ahemp_007962-T1 in Acropora hemprichii

Genomic Location: scaffold_22:1166901...1173144
NR annotation: XP_029185138.1, protein lin-7 homolog C-like [Acropora millepora]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q0P5F3	Protein lin-7 homolog C OS=Bos taurus OX=9913 GN=LIN7C PE=2 SV=1
Q5F425	Protein lin-7 homolog C OS=Gallus gallus OX=9031 GN=LIN7C PE=1 SV=1
Q9NUP9	Protein lin-7 homolog C OS=Homo sapiens OX=9606 GN=LIN7C PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02828	L27	L27 domain	Domain	Interproscan
PF00595	PDZ	PDZ domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004172	Domain	L27 domain	Interproscan
IPR036892	Homologous_superfamily	L27 domain superfamily	Interproscan
IPR001478	Domain	PDZ domain	Interproscan
IPR014775	Domain	L27 domain, C-terminal	Interproscan
IPR051109	Family	Membrane-associated multiprotein complex regulator	Interproscan
IPR036034	Homologous_superfamily	PDZ superfamily	Interproscan
IPR017365	Family	Protein lin-7	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14063	PROTEIN LIN-7 HOMOLOG	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005911	Cellular Component	cell-cell junction	Interproscan
GO:0007269	Biological Process	neurotransmitter secretion	Interproscan
GO:0016323	Cellular Component	basolateral plasma membrane	Interproscan
GO:0045199	Biological Process	maintenance of epithelial cell apical/basal polarity	Interproscan
GO:0045202	Cellular Component	synapse	Interproscan
GO:1903361	Biological Process	protein localization to basolateral plasma membrane	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K19931	LIN7; protein lin-7	-	Membrane trafficking	ko04131	deepkoala