Detailed information of Ahemp_008930-T1 in Acropora hemprichii

Genomic Location: scaffold_25:2561896...2565650
NR annotation: BAQ19097.1, paired box D2 protein [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q0IH87Paired box protein Pax-3-B OS=Xenopus laevis OX=8355 GN=pax3-b PE=2 SV=2
Q645N4Paired box protein Pax-3-A OS=Xenopus laevis OX=8355 GN=pax3-a PE=2 SV=1
P23760Paired box protein Pax-3 OS=Homo sapiens OX=9606 GN=PAX3 PE=1 SV=2
Gene familySubfamily
Transcription Factors FamilyHomeobox
Transcription Factors FamilyPAX

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00292PAX'Paired box' domainDomainInterproscan
PF00046HomeodomainHomeodomainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001523DomainPaired domainInterproscan
IPR001356DomainHomeobox domainInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR017970Conserved_siteHomeobox, conserved siteInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR043565FamilyPAX familyInterproscan
IPR043182DomainPaired DNA-binding domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45636PAIRED BOX PROTEIN PAX-6-RELATED-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0048856Biological Processanatomical structure developmentInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K09381PAX3_7; paired box protein 3/7-Transcription factorsko03000deepkoala

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