Gene detail

Detailed information of Ahemp_009151-T1 in Acropora hemprichii

Genomic Location: scaffold_26:2170252...2175263
NR annotation: XP_029186600.2, doublecortin domain-containing protein 2C-like isoform X1 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Ahemp_009151-T1

CTAATAGCGATCCATGTGTCGAAGATACCTATCATGCGATTTCATTGTGATTTAAGCTACAATTATTGAACAGCAAGAATTAAACAGCAATGAAGTAAGAATAAACATTTTTCAAAAATTTGGCCCGCAAGTCGATTTAAGGGACAAGAAAAGCAAGGAGGCAGTATGACTGCGATGGTGTCGTCTGTACCCCCAACAGCATTGACTGTAAAGGTTTACAAGAATGGTAACAGCACATTTCTGGGTAAAACTCTCGTTATCAACAAACGTTGTACAAGGACGATGGAAGCATTGTATGATCAGATAACCGCTCACATTTCGGCGTATAATGCCGTAAGAAGAATTTGTACACCGATTGGGGGTCGGCCGGTGGCGAATCTTGAGAGTATAAAAGACAAAAGCGCGTATGTTGCTGCAGGGAGAGAAGAGTTTAAAAAACTGAATTACGCTGATATAGGAGCATCAAAACAGCGTCGAGCTCGTAAAACTAATAATGCGCCTAGAAAAACCATCATTGTTGGAGAAGGAAGACATAAAATGGATTATGAGTGGGCAAAACGGGATTTGAAAATCCTTTATGTATTTTGCAATGGAGACGTGTTCAAGCCCAAAGTAAAAATAGTTCTTCAGAAGAAATTTCAACAGAGTATGGAACAGATTTTGAGTATTGTACAAGAACACGTTGTAATGGCGGCTGCAATTGCTGCCCTTTATACCAAAGATGGTAAACTGGTTTTAAGTCCGAGTGAGTTGGTCTCAGGAATAGATTACGTAGCAGTTGAAAGGGGACGAGCCTTTAAACGGATGAACTACGGTGGAGCCTCCTCTCCTCTGTCAAAAAGCTCTAGAGCGCGATTTTTGCCTCACATAGGCAATGGCCAACTAATCAACGCAGTACAGCTTCAGAGGAGAAAGGCGGTGAAACAAAAGCCCAGATTATTAAAAACCAACACCAAGGAAAAGACAGATGAATTGTCTTCTGACGCCATGCAGCCATTTTCACCAGACTTACCGCCTGCTCTCGGTCTGAGTCAGCTGCGCGAATCGCAAGATGTCGAGAGCATCAACAATTTTACGATATCCAGTTCGCCCCCTGGATGGTTTGGCGAGGACACCCCTCTTCCTGGGGACACTGGAAACAATGAGGAAAAGACATCAACTGTTGGAAATGTGTTCACCGCGAGCGGGTTGATGAAGGAAAAAGCAGATGAAGTCAGGGAAACTCGCCAAACAAAGGAGGAGAAACCGATTGACCTTATTACGGCAGAAGAGGTTCTTGAGGAAGAGCTTCATGGTGTTGAGAAAGAACTGACGAACAACGGAGACAAACAGTCAAAAGAACAAACGAGGGAAATGGAAAAAGAGGGATTTAATCACAAATCCGTCTCAAGACCACCAGGTGAAGGTTCCACCAGAAATGAGACTTCTCTTCGTTCATCTAGGGAAGGACAACGAAAAACTTCAGTTTCTAAACAGGACACAACCACCGACGGAGAAAACATCGAAAACAATAGTAATGTTGTGAATTAGTTGATTGCTAACAGAACAAAACCAAGCTCGCACTGAATGTACCGTCACGCAGTTGGCGTACATTTTTCTTTCCTCCCTTTTTTCTGTCAAAAACTCTCTCTTCTCCTTTTCACACCGACCCCCTACACAAAAACCGTCTGTCAAGACGTTACATAAATGTAGTCACGTAATTTCCGACAGCATAACTCTAAGTTTATGAGGTTTCGCTAGTGACTTAGGTTACTCTCTGAAAAAGAGTTAAGAATGTTAACTTAATTAAAGATACCTCAGCAGTGGAGCCAAGAACGACGATGGGGAATGAAACTCTCGCATTTCTTCAAGAAACGACATATTAGATCTTCTCTTCAAGTATTTCATACAATGAGTTGGTATAATGAGGCCATATGCCCAACTTCGTTCCCAGGGTCTCTCATCTTAACGCCTGGGGTTTGAGAGACCCTGGAAACGAGGTTGCCATATGCCTTGACATATTATATTGTACAGGCTGTTGTAAATTATTTAAAGTAAGAGTGGCTTTCCTTGTTATCCGGCTTATCAGCCATCAGCTCACAAGTCTGAGAGAGGCAGGATGCTAAGGGTCCACGTATATGACTGGAGTAAAGTTTTATTCTACCTTTTGTGGGTTGTCTAAATGAAAGCCATTAGGGGACTGTTTGGGAAACTCACATTCCTGCTTTTGAACAAACGTTTCTGAAAGAAATTCACCGG

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03607	DCX	Doublecortin	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036572	Homologous_superfamily	Doublecortin domain superfamily	Interproscan
IPR003533	Domain	Doublecortin domain	Interproscan
IPR049626	Family	DCX/DCDC2-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23004	DOUBLECORTIN DOMAIN CONTAINING 2	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0035556	Biological Process	intracellular signal transduction	Interproscan
GO:0005815	Cellular Component	microtubule organizing center	Interproscan
GO:0005874	Cellular Component	microtubule	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K23405	DCDC2; doublecortin domain-containing protein 2	-	Cilium and associated proteins	ko03037	deepkoala