Detailed information of Ahemp_010122-T1 in Acropora hemprichii

Genomic Location: scaffold_31:2157014...2170177
NR annotation: XP_044174481.1, uncharacterized protein LOC114956219 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q1L8P7Thrombospondin-3b OS=Danio rerio OX=7955 GN=thbs3b PE=3 SV=1
P35445Cartilage oligomeric matrix protein OS=Bos taurus OX=9913 GN=COMP PE=1 SV=2
Q9R0G6Cartilage oligomeric matrix protein OS=Mus musculus OX=10090 GN=Comp PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02412TSP_3Thrombospondin type 3 repeatDomainInterproscan
PF05735TSP_CThrombospondin C-terminal regionFamilyInterproscan
PF13385Laminin_G_3Concanavalin A-like lectin/glucanases superfamilyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003367RepeatThrombospondin, type 3-like repeatInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR008859DomainThrombospondin, C-terminalInterproscan
IPR017897RepeatThrombospondin, type 3 repeatInterproscan
IPR028974Homologous_superfamilyTSP type-3 repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10199THROMBOSPONDINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0007155Biological Processcell adhesionInterproscan
GO:0005576Cellular Componentextracellular regionInterproscan
GO:0062023Cellular Componentcollagen-containing extracellular matrixInterproscan

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