Detailed information of Ahemp_010756-T1 in Acropora hemprichii

Genomic Location: scaffold_36:334665...352592
NR annotation: XP_015764699.1, PREDICTED: protein YIF1B-like isoform X2 [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5U3G6Protein YIF1B OS=Danio rerio OX=7955 GN=yif1b PE=2 SV=2
Q9CX30Protein YIF1B OS=Mus musculus OX=10090 GN=Yif1b PE=1 SV=2
Q6GN58Protein YIF1B-A OS=Xenopus laevis OX=8355 GN=yif1b-a PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07645EGF_CACalcium-binding EGF domainDomainInterproscan
PF03878YIF1YIF1FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000742DomainEGF-like domainInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR009030Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR049883DomainNOTCH1 EGF-like calcium-binding domainInterproscan
IPR005578FamilyYif1 familyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14083YIP1 INTERACTING FACTOR HOMOLOG YIF1 PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005789Cellular Componentendoplasmic reticulum membraneInterproscan
GO:0006888Biological Processendoplasmic reticulum to Golgi vesicle-mediated transportInterproscan
GO:0005793Cellular Componentendoplasmic reticulum-Golgi intermediate compartmentInterproscan
GO:0030134Cellular ComponentCOPII-coated ER to Golgi transport vesicleInterproscan
GO:0030173Cellular Componentobsolete integral component of Golgi membraneInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K21988TMC; transmembrane channel-like protein-Cilium and associated proteinsko03037deepkoala

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