Detailed information of Ahemp_010852-T1 in Acropora hemprichii

Genomic Location: scaffold_36:1489545...1504870
NR annotation: XP_044163480.1, LOW QUALITY PROTEIN: endoribonuclease Dicer-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A0A974H8H3Endoribonuclease Dicer-L OS=Xenopus laevis OX=8355 GN=dicer1.L PE=2 SV=1
A0MQH0Endoribonuclease Dicer OS=Cricetulus griseus OX=10029 GN=DICER1 PE=2 SV=3
Q6TV19Endoribonuclease Dicer OS=Danio rerio OX=7955 GN=dicer1 PE=2 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF20931Dicer_platformDicer, platform domainDomainInterproscan
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan
PF20932Dicer_dsRBDDicer, dsRNA-binding domainDomainInterproscan
PF00636Ribonuclease_3Ribonuclease III domainFamilyInterproscan
PF02170PAZPAZ domainDomainInterproscan
PF03368Dicer_dimerDicer dimerisation domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000999DomainRibonuclease III domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR048512DomainDicer, platform domainInterproscan
IPR036389Homologous_superfamilyRibonuclease III, endonuclease domain superfamilyInterproscan
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR003100DomainPAZ domainInterproscan
IPR044441DomainDicer, double-stranded RNA-binding domainInterproscan
IPR038248Homologous_superfamilyDicer dimerisation domain superfamilyInterproscan
IPR005034DomainDicer dimerisation domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14950DICER-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004525Molecular Functionribonuclease III activityInterproscan
GO:0006396Biological ProcessRNA processingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0030422Biological ProcesssiRNA processingInterproscan
GO:0031054Biological Processpre-miRNA processingInterproscan
GO:0016891Molecular FunctionRNA endonuclease activity, producing 5'-phosphomonoestersInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0016442Cellular ComponentRISC complexInterproscan
GO:0090501Biological Processobsolete RNA phosphodiester bond hydrolysisInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11592DICER1, DCR1; endoribonuclease DicerEC:3.1.26.-
Chromosome and associated proteinsko03036deepkoala

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