Detailed information of Ahemp_011262-T1 in Acropora hemprichii

Genomic Location: scaffold_39:2121959...2126043
NR annotation: XP_015777077.1, PREDICTED: collagen alpha-1(IX) chain-like isoform X1 [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01391CollagenCollagen triple helix repeat (20 copies)RepeatInterproscan
PF02210Laminin_G_2Laminin G domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR008160RepeatCollagen triple helix repeatInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR050632FamilyNematode Cuticular CollagenInterproscan
IPR048287DomainThrombospondin-like, N-terminal domainInterproscan
IPR001791DomainLaminin G domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24637COLLAGENInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
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TOP