Detailed information of Ahemp_011280-T1 in Acropora hemprichii

Genomic Location: scaffold_40:60021...61770
NR annotation: XP_015758958.1, PREDICTED: H/ACA ribonucleoprotein complex subunit 4-like [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5ZJH9H/ACA ribonucleoprotein complex subunit DKC1 OS=Gallus gallus OX=9031 GN=DKC1 PE=2 SV=1
F1Q749H/ACA ribonucleoprotein complex subunit DKC1 OS=Danio rerio OX=7955 GN=dkc1 PE=2 SV=1
P33322H/ACA ribonucleoprotein complex subunit CBF5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=CBF5 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08068DKCLDDKCLD (NUC011) domainDomainInterproscan
PF01509TruB_NTruB family pseudouridylate synthase (N terminal domain)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR020103Homologous_superfamilyPseudouridine synthase, catalytic domain superfamilyInterproscan
IPR012960DomainDyskerin-likeInterproscan
IPR004802FamilytRNA pseudouridine synthase B familyInterproscan
IPR002501DomainPseudouridine synthase II, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23127CENTROMERE/MICROTUBULE BINDING PROTEIN CBF5Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0001522Biological Processpseudouridine synthesisInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0009451Biological ProcessRNA modificationInterproscan
GO:0009982Molecular Functionpseudouridine synthase activityInterproscan
GO:0000495Biological Processbox H/ACA sno(s)RNA 3'-end processingInterproscan
GO:0006396Biological ProcessRNA processingInterproscan
GO:0031118Biological ProcessrRNA pseudouridine synthesisInterproscan
GO:0031120Biological ProcesssnRNA pseudouridine synthesisInterproscan
GO:0031429Cellular Componentbox H/ACA snoRNP complexInterproscan
GO:1990481Biological ProcessmRNA pseudouridine synthesisInterproscan

TOP