Gene detail

Detailed information of Ahemp_011545-T1 in Acropora hemprichii

Genomic Location: scaffold_41:921280...933983
NR annotation: XP_029191790.2, indoleamine 2,3-dioxygenase 2-like isoform X1 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Ahemp_011545-T1

CTCAAAGTAATAATTGTGCACCAAAAGCGAAGATACCAGTCCGATCCGGAATCCGATCCAGGTTTTGTTGACGGCCTTAATTTCCTTTCTTTTGGTGGTCACGCAAACCCGCAAGACATTCAACAGAGGGCTAGGGAGGTCTTTGCTAATGTTCAATGTGCGGTTGTGATGAATCTTGATACCTTGAGGACAGCTGTACTTCACTTTTTCTTATTTTCTTTCTCTCCCGTCGGCCTCGCGTGTCTTATGCGTTGCGTCAAGAACTCTAATGACCCCATAAGCGCATAGTGTGAAGGAAGGAGTCTTGCTTTGCTTTAATGAGCTTCAGCACTCGAAAATCACCTCGTGACTAAGGGCTGTTCACACATTTTGGTAGCCTCATACACCCGTAGCCTTTTACAGGTATACTTCGAGCCGGCCACCTTGCTGAATAGGGCAGCCACAACACCGGGAACTTCATGCCCTACTCTTTTCGACGAGTGTGTGGGTTCTTTAACGTCCCACAGAATTTTAGAGTTGAAGAAATTGCGAGACGGGATCTCCGGCTTATAGTCCTTATCCGAGAAGACTTGAAAGTCTAACCATTTGCTGATGTAATTACAAAGGCAGCACTTTCTCCTCAGTTATTTTAAGACCCTGAGTGTTGGTCCGGCCGGAGTCGAACTCACAACCTCCCGCATGACAACCCGATGCTCAACCAACTGAGCCACCGGTCGCGGCGAAGTGGTCCAACTTCACTAATTTTGCAGATGGCCTCTTGCCGGTCGATGCGAGATTTTTGTCTGTTGTCATGACAAGGAAGGAGAACTTTTCCAGGGCATTTTTGTCCAGTTTGGAACCTCAATGTGCGGCTATTATTTGTGCTCTTCGTACGTGAGAATCAAAAAACGCCAGTGGCCCCCAGGGTTAATCAAATCCTCTCAATCCAACCGAACTCACCCAACTCCCCTTATTCGGAAAGTGGATCAAGCGGACATGGCCTCCGTCCCTTCACCAGTTGAATTCGATGTTTCACCAGTTGTAGGATTCGTTCCGGAGAAAGAGCCGTTACAATGTTTACCAGAGTATTTCTCCCCTTGGGAGGAACTTGCAAGTAATTTGCCAAACCTGGTGAAAAGTCCTGGAATTCTGCATCAAAGGATTAATAAACTCCCTTTGTTGGACCATTGCAATCTTTCATCAGAAGATGAGTGGAAGAGAGCACATTTGGTCCTCGCCTGTATTTCTCATGCATATGTTTGGTGCAAGGGAGAGACAGGAGTAGCAAAGGTTCTTCCAAAGTGTCTTGCTGTTCCTTGGGTTGCAGTAGCAAACTATTTAGGTATTCCTCCAGTAATAACACATTGTAGCTTTGCACTTTACAACTGGAAATATATTGATCCAAGCAAGCCGCTTAGCATGGACAATATGGAAGTGGCAATTATGATGACTGGTTCATCAACTGAGAAGGGCTTTATCAAAATTCCCATTGTTATGGAGTTAGAGTTTGGAAGAAAAGGCCTGCATGCAATCATTGATGGACAAAAGTCCGTTAAGAATGCAGGAGATAAAGCAGGAGTTATGGAAGCACTGAAATTGATCAAGGCAACAGTGACAAGACTAACAGAAATACTGTTGCAAACTAATGATGTTGTTGATCCTAATGAATTCTATCATAATTTGAGAAAATATTTCACTGGGTGGGATGGAAATCCCAATTTGCCGCATGGTCTCATATATGAAGGCGTCAGTGAGACACCGTTAAAATACTCTGGAGGAAGTACTGCGGAATCTGCAATATTTCAAGTTCTTGATGCTGCCTTAGGTGTCACTCATGTGAAAAATGCTGATAGCAAGGCAGAGGGCTCTTTCTTAAATAGGATGCGTTATTACATGCCCCCCAAACACCGTGCATTTATCGAGGCTgtggagcaaggcccatcaatcaggaattttgcactaacaagaggagatcctcaactgcttgaggaatacaatgaatgtgtgaagaaattgaaggatttcaggagttctcacttacaaattgttgcaaggtacattgtgattccaggaaataaaggaaaatcaaataaacagctgggaatggccatgagaggtactggaggatctgatctaatgtctttcctgaagcaagtgcgaaaagaaacaggtgaagctgtcatctgcaacgacaacaataacatgtcagtgaaagaaaaggaagcaaatggtgtcactgatgccaaacaactcaaatgaaatacaggaaaaaatgggtactccaagaaaatcataataccagggtaagagtgcttcccatatcctatcaaagaaactgagcaccacaactttggtaggactatcaatctcatgaagttcctttcctccagttacactgtaactgaagctatctctccaccaaactagtgcagtagtgattttcagatc

Protein

Uniprot

Uniprot term	Description
F1LV46	Indoleamine 2,3-dioxygenase 2 OS=Rattus norvegicus OX=10116 GN=Ido2 PE=2 SV=4
Q8R0V5	Indoleamine 2,3-dioxygenase 2 OS=Mus musculus OX=10090 GN=Ido2 PE=1 SV=3
Q9ERD9	Indoleamine 2,3-dioxygenase 1 OS=Rattus norvegicus OX=10116 GN=Ido1 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01231	IDO	Indoleamine 2,3-dioxygenase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR037217	Homologous_superfamily	Tryptophan/Indoleamine 2,3-dioxygenase-like	Interproscan
IPR000898	Family	Indoleamine 2,3-dioxygenase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR28657	INDOLEAMINE 2,3-DIOXYGENASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0019441	Biological Process	tryptophan catabolic process to kynurenine	Interproscan
GO:0020037	Molecular Function	heme binding	Interproscan
GO:0046872	Molecular Function	metal ion binding	Interproscan
GO:0004833	Molecular Function	tryptophan 2,3-dioxygenase activity	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0033754	Molecular Function	indoleamine 2,3-dioxygenase activity	Interproscan
GO:0034354	Biological Process	'de novo' NAD biosynthetic process from tryptophan	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K00463	IDO, INDO; indoleamine 2,3-dioxygenase	EC:1.13.11.52	African trypanosomiasis	ko05143	deepkoala