Gene detail

Detailed information of Ahemp_011736-T1 in Acropora hemprichii

Genomic Location: scaffold_42:1557530...1560559
NR annotation: XP_015771808.1, PREDICTED: uncharacterized protein LOC107350099 [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Ahemp_011736-T1

AGGAACTTTATATCGGAAGATGTATCTCAATACTGGCGATGATGTCAATCACAAGCGCCGCCCATGAATACCGCCAAGCACTGTTTTCAACCAGCGAGAATTGTCTCCTGTTTGATCCAAATCCTCTTTCAGTGAGAACTACAATGTCTTCCGTTTCTTGCTCTCTTCGTTGCGCTCGAGAAAGGCACTGTAAAAGCGCTAACTTTGTCGCAGGAGACAGTTCTTGTTCCCTTCTTGATAAAACAGAGACTACGCATGCGCATCTTGTGCAGTGCGGACATTTTGGTGCAGCATATTTGAAAAAGGTCCATTCCGATACAGGTTCCATACCGCAACTCGCCATTCCTTCCTGTAAGTCTTTGAATCAATCTTTTCATCCAAGTGGAGTATACTGGGTTGATCCCGATGGTGGATCCCATGAAAACGCGTTCAAGGTATACTGCGAAATGGATACAGATGGAGGGGGGTGGACCCTAGTATGGAGTTACAAGTTTACTCGTTACCAGCCCTTTAACTCGTCAGAGAACGCCGTTACTCCCCGACCGAACTGGGCAACGAACAACGCGAGAGTAGATGTTTCCATTTCTACCAGTCCCCCACTTCACGAAGAAGACTACAATGCGTTCAGTTTTTCGCTTTGGAAGCAATTTGGTCAAGAGATTCTCCTCAAAAGTAACATTATGACCTGGTTTATTTGCTCTCCCGACGTCGGAAATTTTGTCGAATGGAAGGATGGTAGGATCAGCTGCAAAGCTGCCAAGCTTATTTCCAAAGTTCAATGCGTGAATGATTCGCCACCAAACGAATTCAAGCGGGCCGAACATACTTGCGGCCCAAGGATAAAGGGATATGGTGTTTTAAATTTTTATTTTGATGGCTGTAAAACTGATGATCATCCAAATCATAATCCATGCAGACTGCCGGATAAACTTCTTCCACCAACAAATGTAAATAACCCGCACGGTAATATTTTACTTCGCTGAAGTTTACCGCTCGGCAACATTAAGCTTAGAACAAGACTGTATTAAAGCCACGCTTGGTCTCTTTACGTAAAACTATACCTATATATTTATCCTTTCTATCTATCAATCGATCGATCCATATAATTGATAGTAAACTCGTTTGGGAACGACAGGGTTGTAATTAATAGCAATCACTTTCTGATCCGTATGGCACTTACACTCACTCACATTGGTACCAAGCACAGTGCTGTGATAATAGTCACTGTTTACTTCGTGTAGAAACGATCAGAGCTCAAAGTTCCAAAGTTCTTTGTTTTATTTAAATGTCTACTTGCCTTAGAATACATTTCATCTTAAGAGAGAGCTTAAGGTTTAGCTAAACGATGGAAGTTTATTTGAATGTTTTTGTGTTGCTGATGAAACCCTAGTATCTGTTCTGCAGTTGTGTGGACAAAGTATAATTATAGGCGCCCAACCACAGCTTTTGTTTTCTTTTTCCAACTCCAAACCGTTTTAATCGCAGGATAGTAAGGGGCAGAATCAATGACATAAAGGGCAAAGACAACGCCACAAATCAAAAATTTGATTGGCCCAATTAGATAAATAAGCGCGCCGCACGTGCAGCACGCCCTTAAGAACTGTTGAACTATTCCGTGCTTCCTCTGCAAAATAACCACGTGAAATTATCACATTTGCGGTTTTCACGACAAATTAAACAAACAACTGCAAATCGTGAAAATTCTCTTTCTTCTTCAACGACGCCTGCTGCAGAAGATATGAAGCGTACTTCGCGGCAACACTGTATTATTTGAACAAGGTAAGAAAATCGTAAAATAGTCACAATAAGCGCAAATAAGTCGCGAGTGCGTTCTTTTCCTCAGCGTTGCCTTCGTCATTGCCAAAGTTCTCAAATAATTTACCGACAAAACGTTGACTTTTCATTTCTCACACAAAGGAGCAAAAGTCTGGATAGCGAACTCATACAGAATTAGCAGTTTCTGCCACCTTTTAAAATTATTTAAATTCAGAGGCTGCCGGCATA

Protein

Uniprot

Uniprot term	Description
P19477	Fibrinogen-like protein A OS=Apostichopus parvimensis OX=1902835 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01410	COLFI	Fibrillar collagen C-terminal domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000885	Domain	Fibrillar collagen, C-terminal	Interproscan
IPR002181	Domain	Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain	Interproscan
IPR036056	Homologous_superfamily	Fibrinogen-like, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR16146	INTELECTIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005201	Molecular Function	extracellular matrix structural constituent	Interproscan