Gene detail

Detailed information of Ahemp_011938-T1 in Acropora hemprichii

Genomic Location: scaffold_44:178769...183650
NR annotation: XP_015750989.1, PREDICTED: uncharacterized protein LOC107330971 [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Ahemp_011938-T1

ctctcccaccgacgcagcaccacagtttctttagaaactagaaattaattcatatatagatatacaaagaagaaaaaacgacataaaaattgACGAAAAGAATTAAGAATTACATTTAGCACAGCCCCTGTGCTCACCCCTAACAAGTTTTGCAAGCTCGTCCCTATGTCCTTTCATCCCCTCCCTGAAAAAGAACTTGCTTTTGTTTTAATTTCAGACCAGACAGAACACTGCAAGATATTGTGTTCAAGATTGTACCTGGTATATATCATGAGGTAAACCGCCGCAAAGAGTTTGATGCCAATCAACAGGAAGAATGCGAACAAGCTCCAGGGGATTCCGCTTCAACTGGCCATAAGGACGAGAAGGGCAAGGAAATTCTACCATTTGATGATCCAGTGTGTATAACCCTGGAATATTTTAGGTATGCTTATACCGTGTCAAGATAGCTGCTCATTCATTTGTTTTTAGTTCATGCATGATCATTCAAGACATTTCAGATTCCTTGTCCAGAATTTTGTGGGTGATGATCGTAAATGAGGTGCGTTCTTGTTTCGCCTTGAAAGTAAACGGGGTAAAATGGCAGTGAGCCAGAAGGATCTCTGCTACTCACAACTTCTTTGATTGCAGGAAAACAAGGAACCGCATGGAAAAAGAGATATTTCCGACTCGCTACCTCCGTTGCTCTTCACTGGTGACCGTCAGTGTGCTGAAGAAATTCGTGATCACGAAGTTTGCCATCCCGGAGACACACATTACCGAAATAATCCGCTCTGATGAAATACTTGATGAAAACCTGACAATGAAAGAAGTATGCAGAATATATGGTCTTTACTCGAAGCCATTTGTGGATCTTCAATACGTTTTTCTAGAGAAAAACGAAACTGCGACTCCTGTAGAAAAGCCAAAGATTGTGGAAGTGAAACGAAAGCGAATCAAAAAACGAAAAGAAGGCGGGAACTTGCTGAAAAAATGTCCTTCTGCCAATGCATATTGTCAACACAGAAATGAAGAGAGCAAGGAATCGAAGTTGCCGTCCTCTCAGAAGAGCGAAAGCGATCGTGACGCTGAAACGGCGCCCGTTCAAGCTCGGCTATTTGAAAAAGTACGAAAAGAAAATCTAGTGCCCAGTGACCTGGACCGGTGTGCGGCCATGAACAGGGACGACCTGGTGTCTACTCAAATGCCCAGTCTCACTGAACATATTGGCAGTGTTTTCGAGGAGAATGACTTTTCATATTGTATAAATATGTCGCGGGAGACCACTGCCACGGTCGCGACCCCAAACTCGGTCGCGAACAAAATTGAAAGTTCATTGATTACTACGCCTACGGTTAATAGTTTCAAGCATGCGCGTTCGTCCAACGCAGACAATGCCTCGAATGTTCTTAATCATGCCAAAGACATGTGTTTGAATCACATTTCCGGGGAATTCGAAGCTTCAGGGATACATTCAGGACTTCTGGTAGAAACGTCTTAGCAATTAAAAATTGCAAAGCTTGGTGTCAATGGAGTTTATCTCGTGCCCAGGAAACATAGATTTTGGGTCAGAGAGGGGGTAGTGGATGACGTAGGAGTGCTCCGATGGCTCCCAAGCACTGCTACAAATAAGTCTATTTTTAGAATACTCGTTCACGAGAAAAAATTAAGTTGCAAAGGTTGCAATGATCTGTGATAAAACCAATTTCCAAAACAGCTACTGAAGTAGTCACTGAATTGATGTCAGGGTCACCTGTGTCATGCATGCCTTATTAGGTGCCTTGTGATTGCCTTTTGTTCGTTTTCGCAAGTAAAGTGCATCTAAAAATAGATATTTGAGACCTTGCCGGGTCAAGACCATGGAATGATGGAGCAAAGATCTTAACTGATTAATCCTTGCTCTAGATAGAAAGAAAAGATTTCAAATTCTTGACACGGCAACGATTCTTTTCTTCCAAAGTGCAAGAAAAAGTCCGAGAGAAAACTCCACTGCTGCTGTGTCTGACCGCACCATAAATTTCGACGCGCGGTAAAACTTAGCGTCATCAACTTTGGACCAATATGACCTATTTCACGACCCA

Protein

Gene family

Gene family	Subfamily
Ubiquitin Family	ULD\|UFD\|RAWUL

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF16207	RAWUL	RAWUL domain RING finger- and WD40-associated ubiquitin-like	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR032443	Domain	RAWUL domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10825	RING FINGER DOMAIN-CONTAINING, POLYCOMB GROUP COMPONENT	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000122	Biological Process	negative regulation of transcription by RNA polymerase II	Interproscan
GO:0035102	Cellular Component	PRC1 complex	Interproscan
GO:1990841	Molecular Function	promoter-specific chromatin binding	Interproscan