Genomic Location: scaffold_52:343958...348348
NR annotation: XP_029184733.2, collagen alpha-1(X) chain-like isoform X1 [Acropora millepora]
| CDS |
| Ahemp_012930-T1 |
| Transcript |
| Ahemp_012930-T1 |
| Protein |
| Ahemp_012930-T1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01391 | Collagen | Collagen triple helix repeat (20 copies) | Repeat | Interproscan |
| PF00229 | TNF | TNF(Tumour Necrosis Factor) family | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR008160 | Repeat | Collagen triple helix repeat | Interproscan |
| IPR008983 | Homologous_superfamily | Tumour necrosis factor-like domain superfamily | Interproscan |
| IPR006052 | Domain | Tumour necrosis factor domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11471 | TUMOR NECROSIS FACTOR FAMILY MEMBER | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0005164 | Molecular Function | tumor necrosis factor receptor binding | Interproscan |
| GO:0006955 | Biological Process | immune response | Interproscan |
| GO:0016020 | Cellular Component | membrane | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K05480 | EDA; ectodysplasin-A | - | Cytokines and neuropeptides | ko04052 | deepkoala |
