Gene detail

Detailed information of Ahemp_013767-T1 in Acropora hemprichii

Genomic Location: scaffold_58:1003215...1012891
NR annotation: XP_029204006.2, diphthine--ammonia ligase-like isoform X1 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Ahemp_013767-T1

ATGAAGGTTGTTGCCCTGATCAGCGGTGGAAAAGACAGTTGTTACAACATGATGCAGTGTGTCCAGTATGGTCACACTATTGTTGCACTCGCAAATCTCAAGCCAAAGGATGGAGCTCCAGAGGAACTGGACAGCTACATGTACCAAACAGTTGGTCACAATGCTATTGACCTGTATGCTCAAGCAATGAACTTGCCATTGTACCGTGAAACAATTCAGGGCTCATCAATTTCTCAAGGCAAAGTATACACGGAATTGGAAGAAGATGAAGTAGAAGACTTGTACAGGCTACTTAAGAAAATAAAGGAGGATATTCCATTTGAAGCCATTTCAGTGGGAGCAATTCTGTCCAATTACCAAAGAGTTAGAGTGGAACATGTGTGCTCTCGTCTTGGACTGTCTTCATTGGCTTACCTTTGGAGACGAGATCAGCAAGAGCTCCTCAGTGAAATGATCTCTTCTGGCATCGAGGCGGTGTTGATAAAAGTTGCTGCAATGGATTTAAGTCCACATCATCATCTTGGCTTGTCAATATCAGAAGTTTACTCTTTAATGTGCAAACTGAAGGAGAGATATGGCTCAAATATTTGTGGAGAAGGTGGAGAGTATGAGACATTCACTTTGGATTGCCCGTTGTTCAAGAAAAAGATAGTGATAGATGAAAGTGAAATCATCATTCACTCTGATGATGCATATGCTCCAGTTGGGTTCCTTCACTTTAAGAAAATGCATTTAGAAGACAAAGAAGAGGCCTCTTTACAGTCTTGTGAAAATCTAAGGTGTACAGAGACCTTGGAAAAGTTAAAAATACAGACAGATAATTGGAATGGTATTGAAATAGCCTCAGATGATACAAAAGTTCAAAGAGTAACTTGCACAGTTCCTCAAAGATCTCAGAATTTCTGTAATGATAGTGTCGGTCACAGTAGAAGTGGTGATTACATTTGGGTTTCTGGAATCTATGGTCAATCTACAGTTGAAGGGAAACTATTATTAATTGAAGACATTACCAGAAATGTCCTGCACAAGTTGACAGAGATATTGAATGGTTTGAAAGCAGACTTCCATGATGCAATGATAGTTCATCTCTTTGTGAAGGACATGAACAATTTTGCCAAAGTCAACTCCATTTACAAGAACATGCTAACAGTTAACCCTCCTGCAAGGGCCTGTATTCAGCTAAACCTTCCTGAAAATATTGCTGTGCAAGTTGATTGTCTTGTTCATAGCCCCAAAACACCTGATGCAACTGTGAGGGAAGCTATGCATGTGCAGAGCATTTCTCATTGGGCTCCTGCTAATATTGGACCCTATAGCCAGGCAACAAAGGCTGGGGGAACGATATTTGTCTCGGGATCCATTGCTTTGTTCCCACCAACAATGACTATTATATCTGGTGGTATCTCAAATGAAGCACCTTTAGCTTTGCAGCATGTTGGAAGAGTCATATCAGCTATGTCTCCTGGGGAATCACTTTGTAGTATTGTACATGGATATTGTTTTCTTACTTCACCATCATTTGTGCCTGTGGCAAAAAGTGCGTGGTCTCAGGCAACAATATCAGAGGATGGTAAACAAGACCTGCCATCACCTGTAGGGGTTATGTCATATGTTATTGTACCAGCTTTACCAAAGGGAGCTCTGGTGGAGTGGCATATTGTGGCACAAGAGAATCAAATCCAGTGTAATGATGTTTCCTCGTCAGTGTCTAGAGGCAGCTTCCTTGTTGATGTCCAAGGCATTAATGTGAAGGGAACTACAAATAACAGCATTGCTGTTAACTTTGCAGTCGAGTCTGATTCAACTGAGTGTCACCTGGTGGAGATAGTGGAGACATTCACTAGTGAAATACGATGCTGCACTTCTCAGTACGGCTTTGATATCACCGATCTAATATACGTGAGGATATTTTATGTCAAAGACATGATGGACCACTGGGATTCACAGGACTGTATTCAAAGTGGCTTAAACAGAGGACTAGATTCTGTAATTGCATTTTCTTTAATACCTGTGGATGGTCTGGAAAAGGAGAATACTATAATATTGTTCAGCTGCTTTTTGCAGAAATCTAGAAAGAAATCCTAA

Transcript

Ahemp_013767-T1

Protein

Uniprot

Uniprot term	Description
Q9USQ7	Diphthine--ammonia ligase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=mug71 PE=1 SV=1
A2RV01	Diphthine--ammonia ligase OS=Danio rerio OX=7955 GN=dph6 PE=2 SV=1
Q2HJF5	Diphthine--ammonia ligase OS=Bos taurus OX=9913 GN=DPH6 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01042	Ribonuc_L-PSP	Endoribonuclease L-PSP	Domain	Interproscan
PF01902	Diphthami_syn_2	Diphthamide synthase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR035959	Homologous_superfamily	RutC-like superfamily	Interproscan
IPR002761	Domain	Diphthamide synthase domain	Interproscan
IPR030662	Family	Diphthine--ammonia ligase/Uncharacterised protein MJ0570	Interproscan
IPR006175	Family	YjgF/YER057c/UK114 family	Interproscan
IPR014729	Homologous_superfamily	Rossmann-like alpha/beta/alpha sandwich fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12196	DOMAIN OF UNKNOWN FUNCTION 71 DUF71 -CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0017178	Molecular Function	diphthine-ammonia ligase activity	Interproscan
GO:0017183	Biological Process	protein histidyl modification to diphthamide	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K06927	DPH6; diphthine-ammonia ligase	EC:6.3.1.14	Translation factors	ko03012	deepkoala